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11-2240-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2870238 [Map]; Strand: c
      • AT3G09340.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G09350.1 - [+] show detail - Fes1A
        Distance: -807; Region: promoter
      • AT3G09350.2 - [+] show detail - Fes1A
        Distance: -807; Region: promoter
      • AT3G09350.3 - [+] show detail - Fes1A
        Distance: -807; Region: promoter
    Flanking Genome Sequence: 11-2240-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATATG 
    AAACTGACCA TAGGAGGTGT AACTCCGGTC AAGAGATCCA CAGAGTGTCT 
    GAATTTTACA TGAAAAAAAG AAGGAAGAAT CTTCACAAAC ACTTCAAATA 
    ATTTCGTTAG ATATCAGAAA AACAAAGTAT TTTATTTTAC CTATAACTCT 
    GAGGCCAGAA AGCGGAATCA TTCTGGGATA ATGAAAAAGA TGCATTGGAA 
    TCATCGTCGT CATTAACATA TGAGACATCG ACATGGCAGT CATCGTCATC 
    TGTCTGAATC AATATGTCCC TTTCTTGCTC CTCAAGATCC ATCTTCGTCG 
    TCTCTGCTTC AAAACAGAGT TAAATCAGAG CAAGTAACAG ATTCCAGGAC 
    AGAACAAACG AAACAGGAAA AAAAGGAGGG AACAGAGAAG TGAAATGAAT 
    ATTGGAAGAA ATATAAAGAG ACGACGAAGA GACTCGGTAT TGAGTTCGAT 
    GTGTTGTCAC GTCTGACGTC TGTCAACTTT GTATTANNCT TAGGAAAAAA 
    AACACTTTGN NTTANTCCAT TGATNCTCTN GATCNTATGN ACGAATNANN 
    TTNTGGNCGC TGGNCNNNAA ATNNANAGNG GNNGGNNCNN NNNNTGNNNN 
    NNNNGNNCNN NNNNNNNGNN NNNNNNNGG

AT3G09340.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G09330.1); Has 5037 Blast hits to 4989 proteins in 303 species: Archae - 8; Bacteria - 84; Metazoa - 1819; Fungi - 980; Plants - 1422; Viruses - 9; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.1

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1C (TAIR:AT5G02150.1); Has 622 Blast hits to 617 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 158; Plants - 182; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.2

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.3

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR