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11-2324-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8329931 [Map]; Strand: c
      • AT1G23465.1 - [+] show detail - Peptidase S24/S26A/S26B/S26C family protein
        Distance: -124; Region: promoter
    Flanking Genome Sequence: 11-2324-1 - 5-prime edge 
    GATTTCACGA AAGTGTGAAA CTTTGAGACG AATCGTTGAG CTTGGGCCAA 
    TGGTGATCTT TGTTAGCTTT TGGTATACTG TATAATCATA ACCCAATTTA 
    TAAACCCGGT TTATTATTAA CCCCTCAGAA ATTGAAATTT GGTTACGTAT 
    AGAACCCGGT TTATGGTATA AGCGTGACTT TTCAAAGCGA TGGGCTGATG 
    GCTCTTACAT TCTCAATAGA TGAATCATTT GATATAAAAG GTGGACAAAT 
    GCTGTTAACA ACAACCTTAA TTATGGTTGA TTATAAACAC AAAAATAATA 
    TCATTTTTTA CTGTATCATA TGCTTCAGAA AACTATTTTA CATATCATCA 
    TCTCTCACTA CAACAACAGT TTGAATATCA CCATCAAAGC TCATCGTGGC 
    CAGTCTCGGC TTCCTCTGAC TTGNGAGTNT GGNCCAAGCC CTTGTCGTNG 
    GGCGAGTGTA AACAGNCCGC CGCCGGGGGG NNTNACTCCN TACCCCNNNC 
    NNGGNGGTGA NTNACACNAC NCCNCNACTN GNCCGGNNNN GNCTTNANAT 
    TNNNTTNNNG ANGANNANNN NNNNNNANNG NANTNNNTNN NT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8330079 [Map]; Strand: c
      • AT1G23465.1 - [+] show detail - Peptidase S24/S26A/S26B/S26C family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2324-1 - 3-prime edge 
    GTTTGATACA GTTGAAGATT TCGGNANGTG GCGTCAAATN TCGTCGTCTT 
    TCTGGACCAC AGCTTCACGA GAAGCCATGA AAAGCGGCNT GTTTGTCNTT 
    GNCCGTNNGC TGANTTCTTC GNGTTNNTCT GNCNAACTNN GNTNCNTNGC 
    TNAANAANAG TNNANGGAAA AAAATTTTNT TTTTTTCCTC TCNGGGGNGA 
    AAAANGTTTT TTGGGGTGCG CCTCTANTTT TTNTTTCAAA ANAAAAAAAG 
    GGGNGGTNNN NACAAANAAA AATTTTNGGG GGGGCNNNAN AAAACNCNCN 
    NCCANNANAA TTTTTTTTNC NTNGGGGGNN GGGGGGGGGA GNGGGAAAAA 
    AAAAANAANN CCCGCANNCC CCCGGGNCNT CNTANTTTTN NNNTNAAAAA 
    AAAAAAAAAA AANAAAGNGN GGGGGGGGGG AGGGGGGGGA NCNAACCCNC 
    CCCGCCGNNT TTNTTTTTTT CCTCNNNAAG GAGTGAGANA NAAANANAAA 
    AGAGNGGGNN GGTTTGANAA AAAAAAAAAA AAANAAAAAA NAAANTANCC 
    CTNANAGNAA ANNGANNANN NNNNGNNNCC CCCCNNTAAA ANANNTATAG 
    NANNNTCGNN CNCNANCCCG GCNCCTNTCT ACCTCGNGGN TTNCNNGGNT 
    GTNNGTGTGC GGGTTNCTTN ANNAGATANT TNNACNCTCA CGNNGTGGNN 
    NGNGTNCGTG TNNGGCNGNG NGNCGTTGCG GGNCGATGCC CGNNNTTTTG 
    CANCTNACTN NNNACCNNCN CNNNNNCACT NGNCNGGCGN ANGNANTNCG 
    TTAGCGCANA AGNAAGAANA NAAAAAAAAA AA

AT1G23465.1

Model type
Protein coding
Short Description
Peptidase S24/S26A/S26B/S26C family protein
Computational Description
Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G29960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR