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11-2325-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29696922 [Map]; Strand: w
      • AT1G78960.1 - [+] show detail - lupeol synthase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2325-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGAA TGCAAGTGAG TTTTTAATTC ACGAGCGAGG 
    TTAATTTATT TGTTATATAC AAAAATGCCT TAAAATCTAA ATAGATTGCT 
    ATAATTGGCT ATATTGTTGA TTTTAATCCA ATTACAAATT TACAATCACA 
    AATTTATCCA ATCTTTTAGT ATTGATTTTC ACTCAGCCAA ATCGCGTTAG 
    GTAAGTCATT TGAACAGGAG ATAAATCAGA TAAACAAAAA TATTATGGCT 
    TTGGGATAAC CAAATTATTC AACCTATTCA GAAAAAAAAA AAAACCCCCC 
    CCNGNAAAAA NTTNCCCCCC GGGGNNGGNA NNNNCCCGGN CCCTNNAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29696943 [Map]; Strand: w
      • AT1G78960.1 - [+] show detail - lupeol synthase 2
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-2325-1 - 3-prime edge 
    CCCCGTTCTN TNCGTNCAAN TGTAAANGGT AGNNGGTNTT TTACCGACCG 
    TTACCGACCG TTTTCATCCA CTACTTCACC CACAAGAGAT CACTGCAACC 
    TTTAACACGG GGACGGTTGT CTAAATAGTT CCGGCGAGCA TCTTCGACGG 
    CGGCTCGTTC CTCAGGTGTG CCGGCTTTGG GATCAAACTC CCATGTTTGA 
    CGTCCGACGA AGTTGTTGCT GCTGAACAAG TAAGGATCTT CTCCATTTCC 
    CTCTCCTATC TTCAACTTCC ACATAACGAT GGTCCTAGCT NTGTATAGTT 
    ACGTGTACAT ATNTATACTC AACGAGTTTA GAATTTCATA GAAATAATCA 
    AATGATANTN TATGAGAGAG TTCAGTTNGN NNACAGGCGT ACGGTNTATA 
    TAGNTNANAN NACCNTGTNT TNNNNNATCC NTNATGTTAT NAATATANAN 
    ANGGANANAG GGNNNGAGGG NNNNANAGGN NNNNNNANNA NTNCTNNNNN 
    T

AT1G78960.1

Model type
Protein coding
Short Description
lupeol synthase 2
Curator Summary
Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.
Computational Description
lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink).
Link
InterPro Scan - TAIR