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11-2366-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1386405 [Map]; Strand: w
      • AT1G04900.1 - [+] show detail - Protein of unknown function (DUF185)
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 11-2366-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATAAAA CTGTAGCGAA GCACTCTCTG AGCTATACAA 
    GCCTTTAGAA GATCCACTGA TTAAGCGGTG CATTGAAATT GTTGAACATG 
    AAGATGATCC GGTTTCAAAA CCAAAAGAAA TTTGGTCTAA ACTATTTCCC 
    AAACCTAGAC GTAGTTGGCT TCCAACAGGT TGTTTGGTAA GAAAAAAATG 
    GTGTCCACAT ATTACAACAG ATGTTGTGTT ACTCTGTTCT AATTTTTGTA 
    ATTTCAGAAA CTGGTAGAGG TTTTACATGC AAAGCTGCCA AAGATGTCCC 
    TAATTGCTTC GGACTTTAGC TTCTTGCCTG ATGTGAAAGT TCCTGGTGAA 
    AGAGCCCCAT TGGTTTCAAC AAAGGTCTGT TCTTTTTTCC GTCTAACTAT 
    GCATTGAAAC ATTTCTCAGT ATTATGTTGA CTGTTTAATC ACTGAGCCAT 
    AGAGGTATGG CCAAAGTTCC TTAACGTCAT ACCTCAATGT TTAAAACAAC 
    AAAAAACTTG GTTTTGGTAC AGAGACAGTG TCTTTCTGCA TTGCTTAATA 
    GCAAACTTGT CTCAAGAAAA CTTGAATACA GTTTCACCCG AAGAAATACA 
    TACGTGAAGT ATAATTATAA TCTCTTATTT GTATTTGCAG AAAGATGGAT 
    GTAGCTCAGA TTACAGTAGT TATCTGGACG CAAAGGTGCG AGATATCTGC 
    AAATTTCCTT CTTTGACTAC TTATTTGGTT TATTCTCAAT TGCGAATCGA 
    GTAGTTTTCT TGACCTNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1386401 [Map]; Strand: w
      • AT1G04900.1 - [+] show detail - Protein of unknown function (DUF185)
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 11-2366-1 - 3-prime edge 
    TTAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCAG 
    TTTATAAGAG ATCGGGATCA ATAAAGGCAG AAATAAACTT CATTTGAGCC 
    AAATATTCTC TGTACCTCTC TGGTTTATTT TCAACCAAGA CTTCCATCCA 
    TGGGGAAAGT TGACTTTTGG AATAGACAAG ATCATGTGGG AGATTATCTA 
    GCACCTGCAA TGGTATAAGT TAATACAAAT ATTACACGTA TGATTCCCTC 
    TTCAATTCAA ATACCAACCT ATCAAATAGA ACCACATCAA CATAATTACA 
    TACCTCAAGC ATTATCACCC AGCACGGTTG TTGCTCCACA TTCTCTGTTT 
    GAAAATTTAC TTTATAAGCA CAGATAGATA ACTTCATAGT CACTAAACTG 
    GGATTGTTCG ATAATATGTG GTTGGCTAAT TTATAAACAT CTTGATTAAT 
    AAGTAGTCTC TAGAAAATTT GGGTATTATC GCTAATTCTA AGTCAAGGAC 
    AATCTAGTAG CATAACCTCA TTTCACTAAC GATTTCTCCG ACTAGCTTAA 
    TCTTCTAAGA ATATTATATT ATTTTTTTTG GCAAACAACT CACTAATTTA 
    ATATTTTCAA CCAAATACCG AATTACCANN

AT1G04900.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF185)
Computational Description
Protein of unknown function (DUF185); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788); Has 316 Blast hits to 314 proteins in 164 species: Archae - 0; Bacteria - 117; Metazoa - 2; Fungi - 113; Plants - 44; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR