1. Home
  2. Mutant Lines
  3. 11-2409-1

11-2409-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1572315 [Map]; Strand: w
      • AT4G03540.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 832; Region: intergenic
      • AT4G03550.1 - [+] show detail - glucan synthase-like 5
        Distance: -1033; Region: intergenic
    Flanking Genome Sequence: 11-2409-1 - 3-prime edge 
    AAAAGAACAA GTGGAGCGTT TTTATTTCAT AAACAGAGAA AAGTCGCTGA 
    ACGGCAACTG CGACCGCTTT GGACGCTAAA ACAAGAACCC TAAAATAAAT 
    CTCATATTTG CTTTTCAATT ATTAGATTCA CATGGGACCC TTTCTTCATA 
    CTCTCGCCCC ATTTCCCTCT CTTTTTCTAG TAACTTTTTC TCCATTTTCT 
    AATGATTTCT TTAGAAGGAT AGAATGTCCC ATAAGCAAAT TCTCAGCTCA 
    AATATTTCAT TAAAATAGCT CATACCTTTT GAGAATATTT CAGTCTGGAT 
    C

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1572431 [Map]; Strand: w
      • AT4G03550.1 - [+] show detail - glucan synthase-like 5
        Distance: -917; Region: promoter
    Flanking Genome Sequence: 11-2409-1 - 5-prime edge 
    GTTCTTTTCT TCTTTCAACC CACTTTGTTA TAACTATTAA CAAATATTGC 
    TTGGTCCAAA TTTTATTATA CTGAATTATT TTAGTTTTTT TGTATCATCA 
    TCCTCAATGT TAGTTTTGAA ATCCTAGGTC AGTAAGTCAA TAACGAAAAT 
    GACAAGTTTA ATTTTGTAAT TGGAACTTAC ATGTCACGGT CTTTGTTTAC 
    GATCATTGCC ACGAATTGTT TAGATACGGG CTTTTTTTTT CTTTCCGNGT 
    TGATGATTAT CGTTTCTTCT TACATATCTT GATCAATCAC TAACATTTAC 
    ATAACCTACA ATTTTGTAAT ATAATTGCAA TACTCGANAT CTTCAAATGG 
    NGATACTGTT AATAAAATTA CNAACTTTTA ATCATCATCA AAATCTATAG 
    AAAAAGATAC ATAGGACCAA AACAAGCCTA AAACAAANAG TTATAATTTA 
    CAAATAAATG CATGTATTTT GTTACTTTTG TTAAGGATTT TCATATCAAT 
    GCATGCATAA TGCATTCTCT TTTTATTTTA TTTATAATGC ATNCTTTTAT 
    AATATTCGGA TNACCANCCC GGGCCGTNGA CCACNCGGNC CCTATAA

AT4G03540.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G03700.1); Has 607 Blast hits to 607 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03550.1

Model type
Protein coding
Short Description
glucan synthase-like 5
Curator Summary
Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.
Computational Description
glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link
InterPro Scan - TAIR