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11-2477-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23921246 [Map]; Strand: w
      • AT5G59300.1 - [+] show detail - ubiquitin carrier protein 7
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2477-1 - 5-prime edge 
    GNCANAGNAT GATGGNAGGA CNAGGNCTCC TANAGACATN TGAAATGCGA 
    GATNTACNTC AATNTGNCAT CNGNNGNNNN TTTCGAGAAG ATTGGATGAN 
    NTCNCCGGGC CATTAACNAC ANCACNNCCA AANAGCATGN GATCTGCGTA 
    CCGGGCATAC CTATNATTCT ACTTTACTAT TCTAACCAAT AGGGTTTTGT 
    GACTTTTCCA CTTTCCGTTA ACTTCCGAAA ATTCTAACAA CGATTGTAGT 
    TTAACCGGTT TTGATTTGGT TTTTACAGAT TTTCGGTTCA GTTTCGGTTT 
    AGTCAGATTG CAAGAAAAAA CAGGTACCAA ATCAAAGATA TCAAAATTCA 
    CTGTTATGTG ACTAGAAGGT TCATATATCA CATGCAAGAC AAAATCAAAA 
    TGCGCATACT TATATTTTTT TTTNNAAANG ATAACCAATT NTGTTGANCN 
    CCTATTTTTT TNTATTNGGG NAGGGGNGGC CAAANAGTTG GGACCTATTT 
    GTCTAGGGGT TGCCAANGTT ATGTCNATAA AAGGATNCCN GANGGTTTTT 
    NATTTTACTT TNNAAAACAT TNNTTTNGGG AAACNGGNNN ANNTACTTAA 
    CCTNGNNAGN AANANACATA NAAAAAAATG GTNNNAACTN TCCTCCNNAA 
    ACNCAANNTT TTTNAACCGG NNATNANTTT ATANNA

AT5G59300.1

Model type
Protein coding
Short Description
ubiquitin carrier protein 7
Curator Summary
ubiquitin conjugating enzyme E2
Computational Description
ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR