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11-2500-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13149 [Map]; Strand: w
      • AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (CDS)
      • AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
        Distance: -378; Region: promoter
    Flanking Genome Sequence: 11-2500-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
    CTCACTCTGC CGGCATTTCT ATATAATATT GGCTAAAAGC TATTGGTTCT 
    TCTACTACAT AGACACGGAT TGTTTAGGAT CTTGTGAAAA TTGAGGTCGT 
    TTTTTTCAGT GTCTCTAGTC CTGTTTGAAT TGAATCTCTC TAGTGTCCTT 
    GATCTGGGGA AAACTTACAG TGTTACTTTT GTTATATATC AGTCCAAGAG 
    GGTTTTTAGC AACTCATTTC TTTCAAAGGT ATTTTCTTCC CTTTACTTGT 
    TAAATATTTG CTTCGACAAC ATTTTCTTTG CTCTTTACAC CCTTTTGGGC 
    TTATATGTTA GTCTCATACC TCTCATCGTT TTTCTTATGC AGGACTCTAC 
    TGGAGCTAAT GGTCAGCAGT GATAATTGTG TAATCAAACT TCAAATCCTA 
    GTGTTGATGT GTACCTTGTT GTTCTGACAA TTGTCTGTTA TACAGGACTA 
    TTGTTTCGCT TCCGAAACCC GCAAGCAAGT ATATGTACGG AAGCTCGTCC 
    AAAGAACATC AACTCATCTT ACTTTACCAG ATCTTTTGCA TCAAGAACTT 
    CAAAAGAACC TGGGAATCAG CAGAATAAGG NGTTTCTTCC TACAAGTTTC 
    TACTTAATGT CTACGTTATG TGTTTGCCAT TTATCACAAC NCAAGCCNNC 
    NAAANCNACA NACAGNNNNN NGNCATNNAA TAATGATGCT TGCTTTGCCN 
    ATTGNNTTAC ANGCTAAAAA AAAGGNGA

AT4G00026.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00030.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR