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11-2617-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23240125 [Map]; Strand: c
      • AT3G62850.1 - [+] show detail - zinc finger protein-related
        Distance: -970; Region: promoter
      • AT3G62860.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 11-2617-1 - 5-prime edge 
    CCAAAATGGA AGATAGTTCC TACAAAAGAT GTTATCGATG CTGCCTTCAA 
    GGATC

AT3G62850.1

Model type
Protein coding
Short Description
zinc finger protein-related
Computational Description
zinc finger protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 530 Blast hits to 298 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 2; Plants - 471; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62860.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 2895 Blast hits to 2893 proteins in 1018 species: Archae - 30; Bacteria - 1827; Metazoa - 110; Fungi - 120; Plants - 454; Viruses - 49; Other Eukaryotes - 305 (source: NCBI BLink).
Link
InterPro Scan - TAIR