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11-2647-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1060002 [Map]; Strand: c
      • AT1G04100.1 - [+] show detail - indoleacetic acid-induced protein 10
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2647-1 - 5-prime edge 
    CGTTTGAGGC GGCAGCCGGA GAAGAATCAG CAGAGCGTTT GGTCCCACTT 
    TCCCTGGTCA GAGAAGAAGA CGAGGAAGAC AAAGACGATC GAACCTTCCG 
    ACGACCAATG CTAAGACCCA AAGCTAGGTC GAGCTCTGTC TCTGACACTG 
    ACTCGTCGGG GCAAGATGAA TCCTCCGACG AATGTGCGGC GTTTTCGTCT 
    TCTTCAGCTG GTAGTCCGAT CATCACCGAC CCACTTGACG AACAAACTTC 
    TTGCAAACCA TTCATTATCC CAAATTGCCA AACGAATACA CAAAGCAAGA 
    ACACTAAAAC CCTTGATTCA AATCCAATTA TCGATCAAGT TTGAAGAAAC 
    CCATTAACCA AGCAAACCAA AAAAAAGGTT TCAACTTTCA ACACCTCTAC 
    GATTCTGAAT TTCGAGACAG AAAAAAAAAA AAANTTGGGG GNCCCCCNGG 
    GTTNNCCNCC NGGGNCNGNA ANCNNCCGNN NCCNTTTAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1060118 [Map]; Strand: c
      • AT1G04100.1 - [+] show detail - indoleacetic acid-induced protein 10
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-2647-1 - 3-prime edge 
    CTCAAACGCA ACCAGGTAAA AAATTCATCT TCGAGACTTT ATATTATAAC 
    CTATATGAAT GATTGGTCTC AGATTGCTTA TTGTTACAGA ATCAAAGCAA 
    CTTAGAGGAT AGAGCTTTTA GACCTTAAAC TTTGAGAATG AATGAATCAC 
    AGGATTGAAT CAAATAGAGT GTTCCCTGAA ATGTTTAGTT AAACTTTTGA 
    ATCATATTGG TTTATACTTG TTCGTCTTTT GATTTAATAT CTTTTGGTAA 
    TGGAGCAGAC AAGTTGCTGT AGGTTGGCCG CCTCTACGGA CTTACAGAAT 
    CAACAGTTTG GTCAATCAAG CAAAGTCTTT AGCTACGGAA GGCGGCTTGA 
    GTTCTGGCAT TCAAAAGGAG ACTACAAAAA GTGTAGTGGT TGCTGCTAAG 
    AACGATGATG CTTGCTTTAT CAAATCGTCC AGGACTTCTA TGCTTGTGAA 
    GGTGACAATG GACGGAGTTA TAATTGGAAG GAAGGTTGAT CTCAATGCTC 
    TGGATTCTTA TGCAGCCTTG GAGAAAACTT TGGATCTAAT GTTTTTCCAG 
    ATTCCTTCTC CTGTAACAAG TCAGTTACTA ATTCTGTTTC ATGAGATTCC 
    ATGTGATTCT GNTTTTCAAA TTCTGNGNCT CTTGAAATTG ACTGGNTTTG 
    ATTGATCNAT TTGNNGATN

AT1G04100.1

Model type
Protein coding
Short Description
indoleacetic acid-induced protein 10
Curator Summary
Auxin induced gene, IAA10 (IAA10).
Computational Description
indoleacetic acid-induced protein 10 (IAA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 11 (TAIR:AT4G28640.3); Has 1513 Blast hits to 1512 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1512; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR