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11-2666-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1689323 [Map]; Strand: w
      • AT1G05640.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2666-1 - 3-prime edge
    CAAGTTAGTT TCCTAGCTGT GAATGTTGTT GAGAAACATG GAATCAAAGG 
    AAGAGCAATG GAGAAACAGG AGAGGGCAAT GGAGAGGCAG AGAAGCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1689439 [Map]; Strand: w
      • AT1G05640.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2666-1 - 5-prime edge
    GNAACTGGNN NGNGCANAGC TTTNNNCTTT CTCACCTGAN NNNNTNCACC 
    AACGCGTGTG AGACTCTGNT GCTCCTCCAC AGAGTTACCT NGAACGCTCT
    CTTGCTTCTC CATAACAGGA ACCAGAGAAC TCATGGTATG CTTCTCCCTT
    AGATTACACA AAGATCTTGA ATAACAACTT TTTCTCCCAA ATCTGAAAGA
    TGCCAACTTT GTTTGAAGAA TCCGTGAGCT ATTTTCCAGC AACCCGTGTT
    TCGTAATAAC AGAACCAGCT TGAAAATGGA AAACCCTGAC TTCCCTGTGA
    TTTCCAGATT TCTTGTAAAG ATTCAAACCG ATGTGATGAA AGAAGAGAGA
    AAAAAAAAAA AANGGGGGGN NGGGNTTTNC NGAAANGGNN NCNNAAACCC
    CAAAAAANNG NTTGGAAAAT NNAAGGNTTT TTNGGGGCNA ANTTTNGGGA
    ATTNNCNGGG NTTTNNAAAN NAAAAAAAAA NNNGGAAAAA NGNNNGGGTT
    TTNNNGGGGG NTTTTTTNNA ANTNCNCNAA AACTNCCNAA AATTTTGAAA
    AAAAAAAGGG ANAANNTTTT TTTTTGGNGG TNNNNANAAA NANTTTTTTN
    ANNTNNNNGG GNAAANNTTC CCCNNNAAAA AATTTTTTNN NNNNAAAAGN
    NNNANNNNGG GGGGGGGAAA AANNCNNCCC NNNNGNNNNN NNNGNGGGGG
    GGGGGNNNNN CCNNNGNCNC NNNCCCG

AT1G05640.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 67578 Blast hits to 27690 proteins in 1106 species: Archae - 88; Bacteria - 6425; Metazoa - 32117; Fungi - 6903; Plants - 5434; Viruses - 485; Other Eukaryotes - 16126 (source: NCBI BLink).
Link
InterPro Scan - TAIR