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11-2692-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5529040 [Map]; Strand: w
    Flanking Genome Sequence: 11-2692-1 - 5-prime edge 
    CTNATGAGCN GCAANACCTN CAAAGAGTAA TTGTNANCGC TCTGGTAGCN 
    GAACCTTTGG AGGAATCTCA ANCCCGTATC CCATNNGGAA TCGGCGGGAA 
    GGANCGNTAT NTNAATAGTA GGNGCGAGGT TGANTGTAAC AGNACCACTT 
    GCGGGTCCTG CAAAACTGNT CCTTTCCTCA CTAGGATCAA NNGGGAAGTG 
    GTGAACATAT NTCTTCGGAN GNTGACTNCT TCNGNCCTTA CNGAGTAGNT 
    AACNTCNAAG GACCNGGGAC TTNTNTGGGT TGAANCTACT ANNACTAGNC 
    ANGGACTTNC AANGACNCTA CCAAATTTNA ACATCACAGG NNNGGGTANT 
    NCATANNNNN NAACANANGA NAACCGACNN GAGNCGGTCA GGTATGTGGT 
    ACGAAGGCGT ANTCTGACCA NATNTAAAAT TGGAGATCAC CNACNCTGNN 
    CAAGGANNAC ACTTGNCCTT ACATGTCTNT GATNCCGNCN NGTGATTATA 
    CTCCATTCCC AAGGAACTGG ATNCCAAATC ATGAGCAGTN NNGCANGANT 
    NCATCANGCT ACAAGACCCT AAATTNTTNN GNGGGNNGAT ANGNNAANAA 
    ACNCNAGGGN NNAACCTNGC CCCANGATGA NATNACCNNN NNNGGNCNNN 
    NACNNC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1510164 [Map]; Strand: w
      • AT1G05205.1 - [+] show detail - unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; ...
        Distance: 0; Region: exon1 (CDS)
      • AT1G05210.1 - [+] show detail - Transmembrane protein 97, predicted
        Distance: -240; Region: promoter
    Flanking Genome Sequence: 11-2692-1 - 3-prime edge 
    AGTCCATGGG GTTTACCGGA AGGTCACCGT GAGCCCAAAG CTCACCGCTG 
    CAACGATCGT GTTGAAGACG TTATCCAGGT TCTCACCATT TCCTTCCTTG 
    TTTCAATTNA AAAAGTTCCA TTTTTTTTCC TTCTGATAAA CCTTTGGAGA 
    GATC

AT1G05205.1

Model type
Protein coding
Computational Description
unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05210.1

Model type
Protein coding
Short Description
Transmembrane protein 97, predicted
Computational Description
Transmembrane protein 97, predicted; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: Transmembrane protein 97, predicted (TAIR:AT2G32380.1); Has 151 Blast hits to 151 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 14; Plants - 77; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G16140.1

Model type
Pseudogene
Curator Summary
pseudogene similar to wall-associated kinase protein family
Link
InterPro Scan - TAIR