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11-2703-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22042783 [Map]; Strand: c
      • AT3G59670.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 70; Region: intergenic
      • AT3G59680.1 - [+] show detail - unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; ...
        Distance: -1221; Region: intergenic
    Flanking Genome Sequence: 11-2703-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTCA TGAAAATATA ATAAATAAGT TCCAAACATT 
    TATTCAAATA TTGGATCGCA AAAACTCGTG AAACAGTAAA TAAGTTCTCT 
    ATATTCATCA TCAAATAGAA TTAATAATAG TGAAACGAAG AAGATGATAG 
    AACTACAATC TAAAGCTCTA TTATACACAG TTTGTGTCTT CACTCTAACT 
    TTTCATCATC ATAAAACGGA AAAGAAGCTA AAGAAGAAAA TGATATGAAA 
    AAAAAGAAGA AGTAAATGTT CTCTGTGAAC ACACAGATTC TGCAGAAATA 
    AAGAAAAATC TAAGAGAATG TTCAGAAACA AAATATTGAA GTAGAAAATA 
    GTAGCTGTGA TTTAAGGGAG ATTCAAAGAG GAAAGACTCT GATCATCAAA 
    AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22189417 [Map]; Strand: c
      • AT3G60080.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 622; Region: intergenic
      • AT3G60090.1 - [+] show detail - VQ motif-containing protein
        Distance: -1441; Region: intergenic
    Flanking Genome Sequence: 11-2703-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
    AACAACAAAC TGAAAATAAA GGATTTGACG TAAAACAAGT TAGTTTATCA 
    TGATGTGAAA AAACAAATTG ATCGAGTAGA AACTCAAAGC ATCCAAAGAA 
    AGTTGGATCA ACGGTTGTAT AATTCAACAC ATGGTAGTTA GTGTAGGGAG 
    ATTTGTTTCA CTAGTTTTAA GGAGAGTAAG TCAACAATCC CGCGTATCAA 
    CATTAAATAA TGACCAAAAC AATACGATTT GTTCTTACAA AAATATCATA 
    CAGCTATTGT TAACTACAAA TGTCAAATTC TTGAAATTTT ATATAACCGA 
    AACACGCTAA TGTCAAACTA TGATCTATTT AAATTAAATA GATAACTTTG 
    ACCTTTAAAT CAGTTGATGC AACATTCAAG TAGTGAACAA AAAAAAATCG 
    ATTGATGTAA CTAATTATAC TTATTTTACT AGTTTGGATA AACNAAATTG 
    TCTGACCTAG TGACCTCTCC ATATGATTAG TGGCCGCTTT TTTTTTGGAT 
    AATNAATTAA TCTTTTTTTT TGGGNCAAAC AATTTTGGAT TTTTGNTCCA 
    GGGAATCAAA ACNTCAAANC AAAANGNTAC CANCCNGGGC CGNNNACCAC 
    CCGGNNCNTT T

AT3G59670.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G59680.1

Model type
Protein coding
Computational Description
unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60080.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G44330.1); Has 9920 Blast hits to 9845 proteins in 282 species: Archae - 0; Bacteria - 98; Metazoa - 2725; Fungi - 927; Plants - 4887; Viruses - 7; Other Eukaryotes - 1276 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60090.1

Model type
Protein coding
Short Description
VQ motif-containing protein
Computational Description
VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G44340.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR