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11-2728-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25514166 [Map]; Strand: w
      • AT5G63750.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2728-1 - 3-prime edge 
    GAAACAAGGT ATTGGAGATC AAATACTGTC CTGCACAGGA TTGCAATTAC 
    GTCATTGAGT TTCATCAGAA GAATCATGAT GGTGCTGATC AGGAAGACTA 
    TGGCTTCAAC GTGGTGTGTC TCTGTGGTCA TATCTTCTGC TGGAGATGCA 
    TGCNTTGAGT CACACAAACC AGTGACCTGC AACAACGCGT CTGATTGGTT 
    GTTTCGAGAC CTAAATAGCT TATCGAAGGA ATCAGGTGAA AAGCCATTGA 
    GCCTCTCCTC GTTCGAAACC AGAGAAAAGA CTTACCCTCT CTCCTCGATC 
    AAAGCCACCA AGAAAGTTTG CCCTCATTGT CTTCGTCCTG CGGATCTTGG 
    TACTAAACAA TACCTCCGGT TCTTGACTTG TGCCTGCAGG TAAGAAACCC 
    TATTTTGCAA ATTAGATTTC TCTATTTGAA GCATTATTGA TCATACTAAT 
    TTGTGTGTTT CTTGATCTAG CGGTCGTTTC TGCTGGAAGT GTATGCAGCC 
    AGAGGAAGCC CACAAAACGG AATCAGGATT CTATAAATTC TGTAATGTAT 
    CGATGACATT CGAGGGAAGA GCACCCAAGA CACTCGAGGG AAGAGCAGAA 
    CCGGAGAATT

AT5G63750.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
ARIADNE 13 (ARI13); FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT5G63730.1); Has 1670 Blast hits to 1662 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 716; Fungi - 141; Plants - 537; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink).
Link
InterPro Scan - TAIR