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11-2778-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1658534 [Map]; Strand: c
      • AT1G05570.1 - [+] show detail - callose synthase 1
        Distance: 0; Region: exon2 (CDS)
      • AT1G05570.2 - [+] show detail - callose synthase 1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2778-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAC TGGCTAATGA AGTTGAAGCT AGTAATCCAC 
    GAGTTGCTTA CCTATGTGAG TTGTAACAAT TTCATTAACT TGATTGTGAA 
    TCATAAAATA ACTTCTTTTC TCAGCTTAAA TTAGCNTTTG AATAACAAAA 
    TTACCAGGTC GTTTCTACGC ATTTGAGAAG GCGCATAGGC TTGATCCAAC 
    TTCAAGTGGT CGTGGTGTTC GCCAGTTTAA GACCGCGCTT CTTCAACGAT 
    TAGAAAGGGT AAATATGAAT GTATACACTT TATTGATTTG ACTAACATGT 
    TGTGTTTAAG TGTTGAACTC ATGCCGTTTA CGTTTCTGAT TACTTCTTCA 
    GGAGAATGAA ACAACTTTGG CAGGAAGGCA AAAGAGTGAT GCACGTGAAA 
    TGCAGAGTTT CTATCAACAC TACTACAAGA AATACATNCA AGCTNCCN

AT1G05570.1

Model type
Protein coding
Short Description
callose synthase 1
Curator Summary
Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.
Computational Description
callose synthase 1 (CALS1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane, cell plate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2); Has 1391 Blast hits to 1051 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 706; Plants - 540; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05570.2

Model type
Protein coding
Short Description
callose synthase 1
Curator Summary
Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.
Computational Description
callose synthase 1 (CALS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2).
Link
InterPro Scan - TAIR