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11-2825-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11506011 [Map]; Strand: w
      • AT4G21660.1 - [+] show detail - proline-rich spliceosome-associated (PSP) family protein
        Distance: 0; Region: exon15 (3UTR)
    Flanking Genome Sequence: 11-2825-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGT CGCTTACAAA ACAAAGCCTT TTTTCCCCAC 
    TTTTTTTGTT CCAAGTCTCA GGCTTTGAAT TTGTTCAAAT TCCAAAAACA 
    AAGTTTTACT TAAGCCTTCA GATAACAACA TAGTATAGAA TCTCATAAGC 
    ATTAAGACTA AAACTCAAGA TC

AT4G21660.1

Model type
Protein coding
Short Description
proline-rich spliceosome-associated (PSP) family protein
Computational Description
proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1); Has 10486 Blast hits to 6076 proteins in 488 species: Archae - 22; Bacteria - 303; Metazoa - 4991; Fungi - 920; Plants - 455; Viruses - 239; Other Eukaryotes - 3556 (source: NCBI BLink).
Link
InterPro Scan - TAIR