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11-2842-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1359389 [Map]; Strand: c
      • AT2G04080.1 - [+] show detail - MATE efflux family protein
        Distance: -136; Region: promoter
    Flanking Genome Sequence: 11-2842-1 - 3-prime edge 
    TATGAAAGTN TTATNGNTAC TACCAAATTT TAGACCCGTA ATTGACTGTG 
    GGACAAATAG TTTTCTCTCT TCAATGTGTG TCACAGAAAA AAATGTTATT 
    CTATTTATTA AGGTAAAAAC AGATATGATA TGATGTACCC ATAATAATAA 
    ATGCTCCATA TAAATTATAT TATTAAGAGG GTCCATATAA ATTATATTTA 
    TTAAACACAT ATATCATGTG CATGAATTGG TTTCTGATTT TNGTAGACGT 
    GGTGGCCTTG TTGTTTCGAT TTTTCAAAAA GTTAATTATT GCCGACAATA 
    GTGAATAGTT TNTTTTCCTT GTTTGATATA ATGTTATGAA TATGATCCAA 
    TTCCGGTTTA ANGTTGGTCT GATGACATTC GGNTTANCAG CANANCGGAN 
    TTGGTTATAG CANCGGNTTC GCTTTNGTTT ACAGAAGANG GAAGTTATGA 
    TTGGAAGACT CTNNTTCTGA NAGATGNTTC TATGCTCGNN GNCAACCCCC 
    NNATATTANA ANTTTGNNAT TNGNCTNCNT TNTNCNNTTC CCNNAACAAA 
    GNAGNNNCGA NNNTNTCGTT AAANNCNNAN AAATNGGGGT CCCATCNTTN 
    GATCNTCGCC NNNGNACNTT TACNATGTCG TNNGACNNNC TAANNTCGNN 
    NGANTCGCNC AGNCCAANTC TGGCNTTANT CGCGATACGN ATAANNNCCC 
    CNNCNNTCNA NTNGGCNTGC GGNAATCCGA TTCNNNGNGN GANNGATTCA 
    AAGNTGN

AT2G04080.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04070.1); Has 9518 Blast hits to 9397 proteins in 1914 species: Archae - 186; Bacteria - 6503; Metazoa - 146; Fungi - 326; Plants - 1327; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink).
Link
InterPro Scan - TAIR