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11-2886-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 279729 [Map]; Strand: w
      • AT4G00670.1 - [+] show detail - Remorin family protein
        Distance: -543; Region: promoter
      • AT4G00680.1 - [+] show detail - actin depolymerizing factor 8
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-2886-1 - 5-prime edge 
    CATTGAATCC ACACAAAATG TAATATAGCG GACAAGCAAA AGCAGAAATG 
    GTCCAAGAAA ATGGCATGTT AAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 279613 [Map]; Strand: w
      • AT4G00670.1 - [+] show detail - Remorin family protein
        Distance: -427; Region: promoter
      • AT4G00680.1 - [+] show detail - actin depolymerizing factor 8
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-2886-1 - 3-prime edge 
    ATTCAATGTC TTTAAATTTG TTTTGTTTTT CACAAGAAAG AAAAAAAAGA 
    ATGATAATTA TTTTGCAAAG ATAGATATTA GATAGTGAAA TTACTCCATA 
    GTGGGGACTT GGTATGGAAT GCTTTGGCAT ATATTGAACA CATGCATCTT 
    ATTTTTTTAT ATGGGGGATT CCATTCTTCA ATGAAAGGAT TATANTAAAC 
    TAACCAAATT ATAAACTAAG AGCAATTAGA ACAACACTTA GTGCTCGCCA 
    ATCATATCAA GATTCGCTAG CTTGCAAGCA TTGTGATATA TTTATTCCTT 
    GCGACATATT AATTTAAAAC GAACGATGGT TTTCAAATAT TCCCTCAAGA 
    CATAAAACGA CACCAATGCA TTGAAACCGA CAGTTCCAAA TTTTCACCTT 
    TTGTAATCGA ACATGTGTGT TACTTCACTA TAAATAGACC TAAATGTGCA 
    TTTAACTAGC AACTAGAACT TAAAGCCTGA AACTCATTCT CAATCAAATG 
    GAGCCAAATA TTCCGATCCA AAGAGGTAAC TCATATCAGT ATTGTTTAGA 
    TTCATGTTGT ATCTTAAATT TTTAGTTTAT ACCTACTACC ACATAGGAGA 
    TGAGCAGTCA AAAGTTATTA AGGCATGGAA GGAACTAAAG ATAACAAAGG 
    TCAATAACAA GTAAGTCACA ACACAAACAC TTTTCAGCGT CGTTTCAGTA 
    CCACTGTGAC AGATTCTCTG ATTGCAGGAC TCAAANAAGC TACTAGATAT 
    TTCAGGATGG

AT4G00670.1

Model type
Protein coding
Short Description
Remorin family protein
Computational Description
Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 353 Blast hits to 353 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 8; Plants - 326; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00680.1

Model type
Protein coding
Short Description
actin depolymerizing factor 8
Computational Description
actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).
Link
InterPro Scan - TAIR