1. Home
  2. Mutant Lines
  3. 11-2929-1

11-2929-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 158465 [Map]; Strand: c
      • AT3G01410.2 - [+] show detail - Polynucleotidyl transferase, ribonuclease H-like superfamily protein
        Distance: -2826; Region: intergenic
      • AT3G01420.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 1001; Region: intergenic
    Flanking Genome Sequence: 11-2929-1 - 3-prime edge 
    CTTTNAAACG GNNGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCT 
    AAGATAGCAA ACAGGCCTCC TAAGTATATA TGGTGGATAG AGTATGTGTT 
    GAAACTGTAA AATCTTCTAC CGGACAAGAA AGTTGCATGA TTGAATTCCC 
    CGCTAGTATA AGACACATGC CAATTATCGA CGCCTCTACT CTGCTCATGA 
    CGTCTTGGAC GTTATATGAG ATGTAATACA TAAGTATCAT CACAACCAAG 
    AAGAATATAT AACACCCGCC CCTCCAGTCC TAATCGATAT CTTGGGATTG 
    GAACATCTTT GAACAAGCAC CTAATTACCA AGGTACAGAG TATTCGCAGC 
    CCTCAGTGTT GTTGCGTATC TAGCCATGAT GAGACATAAT ACAATTAAAA 
    ATCATCCAAA TAACTACATC AAATCAAATC TATATACAAC AACAATTTCC 
    TTAATCGTAT TCGGGCATAC AACTAGGGGT TCAGTTTCTA AAAAGATTTG 
    TAATGATACT CTCAAGGCAA ATAGGCAATG AAATAATATA ATAGACGACT 
    ATAAAGACAA GTCACTTCTT TAACTCTCTT TTCGCCTCTC ATTTTCTGTG 
    ATTAATTACG ACGAGGCGCA CAAGACTACA GAGAAGAAAC AGGCTAAAAT 
    GTTATATATG TCTAAATGAT GAATGCAGAA TGCGTGTAAG TCTTTTTATA 
    CTAATTCAAA GGTGATAAAA AGAGATTTGA TTAAATCTGT ATCCAATCAN 
    AGTTTGATAA AAATTTTACC AATTTAACAC ATAATTA

AT3G01410.2

Model type
Protein coding
Short Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Computational Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01420.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Curator Summary
Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.
Computational Description
DOX1; FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: alpha dioxygenase (TAIR:AT1G73680.1); Has 1465 Blast hits to 1381 proteins in 214 species: Archae - 0; Bacteria - 94; Metazoa - 1085; Fungi - 168; Plants - 70; Viruses - 1; Other Eukaryotes - 47 (source: NCBI BLink).
Link
InterPro Scan - TAIR