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11-2944-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3348651 [Map]; Strand: c
      • AT1G10200.1 - [+] show detail - GATA type zinc finger transcription factor family protein
        Distance: -766; Region: promoter
      • AT1G10210.1 - [+] show detail - mitogen-activated protein kinase 1
        Distance: -568; Region: promoter
      • AT1G10210.2 - [+] show detail - mitogen-activated protein kinase 1
        Distance: -584; Region: promoter
    Flanking Genome Sequence: 11-2944-1 - 5-prime edge 
    ATTATAGTAG CAAATAAAAA TAACGTTAGG TATTTTTGAT TAAATAAAAG 
    ATGTTAGGTA TCATCATTAT GATCACTCAT TCTCTTCAAC CAATTATGTC 
    AATACTACAG CTCATCAAAA GCCTTTATGG TAAAGCATGT TTCAGATATT 
    TTCATTATTC ATATACACAC TACACAACAT ATACTAAAGA AAAAAATAGT 
    GTATAGATAT TTAGAGATTT CCAACTAATT CAACATAACC AATACAGCTT 
    TTANTCATTA TCTAAAACCA GACAAAGATT CTTTCCAGTA GNNNTTNNCT 
    GNNCTANGGC CTTNCAAACA GNNNATNNGA CTATTGAGCA TNGCCTCCCT 
    GGNGAGAAAA ATNGNNTAAA NATTACGCAC TGNNNANCAA CTGGNNTGCN 
    TNANNNNAAA NTANTNNCCN GGNCTNCNTN NNATTANNCA ANCNNNAANN 
    ACTNNNANAN CAAATNNNTN NGCNNNCAGN CTNCNGGNNA NANAGANAGT 
    GNANNNGNNA NTNTGNCCGT NTGNNAAAAG NNNGTNNGNA ACCNCNAANN 
    NCNGCANNNT NNNCNCGGCT TTCNANACNN NNNACNANNA NANGNAACNA 
    NNNNNGNNTC NNGGTCTNNG TANGNNNAGN NNAGGNGNAN NACNTCNNTG 
    TGNGAAGGAG ANNNNCANTN GNANNNNNNN NNGGNNGNNA NAGNNANNNN 
    CNNNNGNGNT NACCNNCNGC AANCNGNAAG NGANCACAAA GCAGCNNGGA 
    AGNAAGCCAC NANANACAAA NA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3348767 [Map]; Strand: c
      • AT1G10200.1 - [+] show detail - GATA type zinc finger transcription factor family protein
        Distance: -882; Region: promoter
      • AT1G10210.1 - [+] show detail - mitogen-activated protein kinase 1
        Distance: -452; Region: promoter
      • AT1G10210.2 - [+] show detail - mitogen-activated protein kinase 1
        Distance: -468; Region: promoter
    Flanking Genome Sequence: 11-2944-1 - 3-prime edge 
    ACTATAATAG ACTCCAACCA TTTTATTAGN ATCATTAAAT ACAGTTTCTA 
    ACATTTTTGC CACTGCTTAG ATTTATGGGC TTTCCCTTTC TGTCTGCATG 
    GGCNCTCCNA AAANAATAAT TAAATAATNT GACNTAANGA AAAACTTTNT 
    AAANCGNGTG GNGGGNGTAT TNNCCCTCTG AGAAGNNTAA NANCNAGCNA 
    AAAGGGGNGA NNANTGNGNG NANGGAAAAC GTAANNGNGN AATTTTTTTT 
    TAANAAGGGG NAAACGGGNG GANTNNNCNN NNTGGNAGGA NGGGNGGNGG 
    GGGGGCCCAT GTGTTTNNGG GGGNCAGTNC CCCNGCANCG CAACNAANAA 
    AAAAAAAAAA AAAGANGTGN NCNCAGAANG GAGGGNNGGN GNNNGGNNNN 
    GAGNNAGAGN NGGNNTNNAT GNNNGNNAGG NGAGCTACAC ANACGGGGGA 
    GNAANNNNNG CAAAANAGGG GNTANGNANN TGNTNGNANG NNNGANANNN 
    NGGTANCGAG ANGANGANGN NTNGGNCCNA ATCTC

AT1G10200.1

Model type
Protein coding
Short Description
GATA type zinc finger transcription factor family protein
Computational Description
WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10210.1

Model type
Protein coding
Short Description
mitogen-activated protein kinase 1
Curator Summary
Encodes ATMPK1.
Computational Description
mitogen-activated protein kinase 1 (MPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase homolog 2 (TAIR:AT1G59580.2); Has 120133 Blast hits to 118709 proteins in 4414 species: Archae - 90; Bacteria - 12052; Metazoa - 45818; Fungi - 12226; Plants - 29321; Viruses - 480; Other Eukaryotes - 20146 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10210.2

Model type
Protein coding
Short Description
mitogen-activated protein kinase 1
Curator Summary
Encodes ATMPK1.
Computational Description
mitogen-activated protein kinase 1 (ATMPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase homolog 2 (TAIR:AT1G59580.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR