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11-2987-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 480851 [Map]; Strand: c
      • AT2G02020.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon5 (CDS)
      • AT2G02020.2 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 11-2987-1 - 5-prime edge 
    ATTTAGCACT ACACAAGCTT CTCATTGAAT CTGGAGATTG CTCATAGAAA 
    AACTCAATCC TCCCAACAAA GAAGAAAACT CCAGCAGTGC CCATTAAAAA 
    GTACTGAGGG ATTTGCCAAA AGATGTTTAA TGGAACAATG TCTCCACTTT 
    CCACTAGATC AAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 480912 [Map]; Strand: c
      • AT2G02020.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon5 (CDS)
      • AT2G02020.2 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon6 (CDS)
      • AT2G02026.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -995; Region: promoter
    Flanking Genome Sequence: 11-2987-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    TTGGGCNNGN NTGAGGGGAN TATNACNACA ACTNTNGGCG NTCCGTAAAN 
    NGNATCANTN NNCCCGNNCC GTAACGCACA NCGAGCNCTN NATTCCTTCG 
    GACAACATTA ACAANGGACN TTNTGANTAC TNGTTNNGGN TTTGGGTCAN 
    NGTATGAGNT TNTGTANNCA NACCNGTTTA CCGNCTNTTN CCGGTGCCNG 
    NNATACNNNN ATGNANGNNN GATNTCTTCT TCTGGCTCTT GTGTGTACTT 
    TCAAATTTGT TTTTTTTTAA ACCAGCAAAT CAGTTATATT AAATCATAAC 
    GGTTTACATG ATACATACAA CAACCATTCA AATATAACTA TTGAAACAAA 
    TAAAGGAAAT TGAACACAAT TTTGATGAAN AAGTGTAAGT GACCCTGCTT 
    TCGAAACGGA TGCTTTCCAA ACGGAAGCCT TACAGGCAAC AAAATAAATC 
    TGTTAAGTCC TNTNATNATA CACTCGCNAA AAGCTAACAT NTTATAGATG 
    AAACTCCTAA ANGCTTTNTG CATTNTTTAN TAANCGAANA ATTTGGNNAG 
    NNGNTCNAAA TGGTNCTGAA TNATGCTTTT NGAAACNCTN TNNANCNGGN 
    TNTGACTNTG NGATNNTNNT TTTNNANGAC TNNTNNNGGN NNNNNNNCAN 
    NANNNNNATT NNNTNTTGNN CNNNTNGG

AT2G02020.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8051 Blast hits to 7680 proteins in 1472 species: Archae - 0; Bacteria - 4049; Metazoa - 790; Fungi - 469; Plants - 2161; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02020.2

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1).
Link
InterPro Scan - TAIR

AT2G02026.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR