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11-3012-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1525525 [Map]; Strand: c
      • AT2G04378.1 - [+] show detail - Beta-galactosidase related protein
        Distance: 0; Region: exon1 (3UTR)
      • AT2G04378.2 - [+] show detail - Beta-galactosidase related protein
        Distance: 0; Region: exon2 (3UTR)
      • AT2G04380.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: -117; Region: promoter
    Flanking Genome Sequence: 11-3012-1 - 5-prime edge 
    TCCAACNNNN ATCNNCACGG GTAAAACTAA CAAAACGGTT ATACGATAAC 
    GGTCGGTACG GGATTTTCCC ATCCTTCTTT GCCTCTGTCT CCGACTCTCA 
    TTGGCCTATC CTTTTAAGTT ATCTCCCTAT GTTGCTAGCT TATGCTTTTC 
    TAAGATTTTT GTAATCTGTT TCATCTTTGA AGACTTTGTA AACTTTGCCC 
    TTAGGGGATT TGATGGAATG AATACAAATC TTGTTTGACA AAAAAAAAAA 
    AAAAAAAAAA AAANCCCCCC CNTNCCNTTT TTTNNNNTTN NTTTTTNNNA 
    AAAAANAAAA AANCCCCCCC CCCNTNNNNT TTTTNCCCCN AAAAAAAAAA 
    ANCCCNNAAA AAANTTTAAA NCCCAAAAAA AAANCCNCCC CCCNGGNNNN 
    NAANNNCCCC CCCCCCNNAA AA

AT2G04378.1

Model type
Protein coding
Short Description
Beta-galactosidase related protein
Computational Description
Beta-galactosidase related protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); BEST Arabidopsis thaliana protein match is: Beta-galactosidase related protein (TAIR:AT5G01080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04378.2

Model type
Protein coding
Short Description
Beta-galactosidase related protein
Computational Description
Beta-galactosidase related protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); BEST Arabidopsis thaliana protein match is: Beta-galactosidase related protein (TAIR:AT5G01080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04380.1

Model type
Protein coding
Computational Description
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR