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11-3027-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29979089 [Map]; Strand: w
      • AT1G79670.1 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G79670.2 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3027-1 - 5-prime edge 
    GGGNNAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATATCT AGATCTTATA GAGGAACGGA GCTAAGGATT 
    TACCGGAGGT GGTGCTGTTA CAGACAACCT CGTACCAGTC GTTGAGAAAA 
    CAGTCTCTTC GTCCGATTCC AAAAGGAAAA GGAATCTCGA TTCCTCCACA 
    GATACNGGTT ACATGAAGTT GAAGAAGAAG GTGGAGATTG AGCTGTCGTT 
    ATCAAAGGAC CATTGATGAA CAGAGTTAGG TCCGATAGAG AGTAGAACAG 
    AGAAAAAAAG TCTCCTTCTC TTCATTTTTT TTTTNTNTAA NGACTTTNAT 
    GTNTNAAAGT TNTNTTTTAA AANTTNTNGA CCCGNNTCGT NGNANTTNGN 
    AAGTTNTNTT TTGNCANCGG NCANGGGATC ANTTTTCNTT NCANGTTTNC 
    NCANNTTNTN GNCCAAATNA NTTTNGTANT TTTTNATAAT AAAAATCTNA 
    ATTTNANTTN TNCAATTTNN CTATNATTTT TTTNCCCAAA NNATTTANCA 
    AAGNGGATTT TNCCCTTNNA TTTTNAATTT CNGGAATTGG CCTTTTCCCC 
    CCCCCNATTN TTTTTTTTTT NTCCANNGGA AAAAGTGNAN TNTNTNATTN 
    NTTAANCNNN GGGNTNNNNN NNNGGGCNNG NNNACNNNCC NNCCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29979044 [Map]; Strand: w
      • AT1G79670.1 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G79670.2 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3027-1 - 3-prime edge 
    ATAAGATCAA CAGAGAATTA NTTAGCATCA CTCTTCGAAG CAGCATCGAC 
    AGTTCCTACG GAGTTGTTCA CATTAAATCT CCGGTGACTT CCTCCGGCTG 
    TTCTCAACGA CCCGTAAAGC CTCTTCCTTT AAACCTCACC GGTAAAGGAA 
    GTCCCTTTTT CATCACCGAC TCGAATCGTC TCGTCTCAGT TGGTTGTGAC 
    AACAGAGCAT TGATTACAGA CATCGAATCT CAGATCACAG GATGCGAATC 
    GAGCTGCGAC GGAGATAAGA GTCGTTTAGA CAAGATCTGC GGTGGTTACA 
    CATGTTGTCA GGCGAAGATT CCGGCGGATA GACCGCAAGT AATCGGCGTT 
    GACCTTGAAA GCTCCGGTGG TAACACAACT CAAGGAGGAA ACTGTAAAGT 
    TGCTTTCTTG ACGAATGAGA CTTACTCTCC GGCGAATGTT ACAGAGCCGG 
    AACAATTTTA TACTAATGGG TTTACGGTGA TTGAGCTTGG TTGGTACTTT 
    GATACATCAG ATTCTCGGTT AACGAATCCT GTGGGTTGTG TGAATTTGAC 
    GGAAACAGGG ATTTACACGA GCGCACCGAG CTGTGTTTGT GAGTATGGTA 
    ACTTCTCTGG CTTTGGTTAC AGTAACTGTT ACTGCAATCA GATTGGTTTC 
    CAGAGGGAAT CCTTATCTTC CTGGNGGATG CATTGGNNAA GANTNATGNG 
    TTTCTNCGNC TATTTGGCTT NAATGGGGGT TNAATTAAGN GATACNGATG 
    NGTNGATTN

AT1G79670.1

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120817 Blast hits to 119164 proteins in 4285 species: Archae - 142; Bacteria - 13548; Metazoa - 44699; Fungi - 10352; Plants - 33861; Viruses - 488; Other Eukaryotes - 17727 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79670.2

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120550 Blast hits to 118930 proteins in 4262 species: Archae - 142; Bacteria - 13516; Metazoa - 44650; Fungi - 10334; Plants - 33695; Viruses - 488; Other Eukaryotes - 17725 (source: NCBI BLink).
Link
InterPro Scan - TAIR