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11-3055-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1663476 [Map]; Strand: w
      • AT1G05577.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-3055-1 - 5-prime edge 
    GGNAAAAACT AACAAAATCG GTTATACTGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATNNC TGGNNCAGNC ANCGGNCCAA NCGTACACTC 
    NGGCCGGAGA CTGTGCGGAN GATCTTGNTN GTTAAGAACA AAACCTTNNT 
    CGTNNAGTGG NGGATTCCTC CGTGACCTGT NTGACGTTGT TGCCGTCGAT 
    CTCTGTGAGC AGAAGACCGG AGACTCTTTT TGGATCTTCT CTGACGTTAG 
    TTTCAACTTC TGGAGTTTTT CTTCAGCGTC TATTCCACCG TTTCTTGTNA 
    CCCAAGCT

AT1G05577.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF966)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 167 Blast hits to 166 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR