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11-3183-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1301308 [Map]; Strand: w
      • AT1G04660.1 - [+] show detail - glycine-rich protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G04670.1 - [+] show detail - unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; ...
        Distance: -553; Region: promoter
    Flanking Genome Sequence: 11-3183-1 - 5-prime edge 
    CCTGACGAGC ACGTGCACAG ACGAAGGATA TGGCGAGCAA GACACAAACG 
    ACTGACAAAG CTCTCGACAT TTCTCTCTTC TCTCTTCTCT TTTTTTTTCT 
    ANATTATATT GATCGTCTTT TATGTTGTTG AAGTTTATAA TGAGTTTCTT 
    AGGGTTTATA TAGCAAAATG TAAGGTTGGT GACAGTTGAA AGTCATAAAT 
    TTGGCCACNA ACCCAATTTA TAACATTTTT CCTTAGTAAA GGCTGTCTGA 
    TGATACAACT ATACCATGGA CGATTGATTG GTCGAGTTTA AATATTTTTT 
    CATTTTTCAT TTTTTCGTAA GTTGTATTGG CTAGNGATAT CAGGGTACTA 
    CAGTCAGCGA GCGAGCATTT GAATT

AT1G04660.1

Model type
Protein coding
Short Description
glycine-rich protein
Computational Description
glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 360 Blast hits to 349 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04670.1

Model type
Protein coding
Computational Description
unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR