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11-3384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23818003 [Map]; Strand: c
      • AT1G64170.1 - [+] show detail - cation/H+ exchanger 16
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-3384-1 - 5-prime edge 
    GTAAGTCCTC CATCAACCGG TTTAGGTCAG TCTTATAGTT TCCGGTTTAA 
    TAAATATCCT ACCAGACTGA AATATGAGTT ATACCGGGAT TCCGTTCAGC 
    TTATTACTGT ATGNGGTTTC TTGGTTAGAA AAAATAATAA CTACAAACCT 
    AATTCCTCTT TAGTCACGGA GAGGTTNGAA GGCGGGGACT CAGAACCAAA 
    GCATCAGGTA GAGCAAATAA AATCAATGTC CAAGTNGGTA GTTCTAAGAT 
    GCGATATGAT TGAATT

AT1G64170.1

Model type
Protein coding
Short Description
cation/H+ exchanger 16
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 16 (CHX16); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: stem, male gametophyte, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 10345 Blast hits to 10314 proteins in 2156 species: Archae - 371; Bacteria - 8080; Metazoa - 56; Fungi - 195; Plants - 675; Viruses - 0; Other Eukaryotes - 968 (source: NCBI BLink).
Link
InterPro Scan - TAIR