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Mutant Lines
11-3526-1

11-3526-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1165216 [Map]; Strand: c
- AT1G04340.1 - [+] show detail - HR-like lesion-inducing protein-related
  Distance: -365; Region: promoter
- AT1G04350.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 0; Region: exon1 (5UTR)

GTGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATTAGG TTATCAAGAA AAATGGATTT ATGTTTTTGC 
ATTCTTGTGG TGAGAGAAGA CAAGATAGAA ACGACAATTT GAGAATTGTA 
TGGTTGAAAA ACGTACGTCC TGTTTTGCTG CTGGTTTAGT TTGGTTCTTG 
ATCAATTGAT TCTGCTCTAG CTTGATCAAA AACGTATGTC CGGTTTTGTT 
GATTGGGACT GGAACTTATG TCAGCATGAC GGTGCCTTTT CATCTTCTTC 
TTGGTTGAGT TTTAAAAATG ATAAAAATTC GGTTTAAATT TTAGTTTANA 
TACTTCGGTT CAATTCGGTT TAGGTTTTCT TTTCCACCTT TAATTGGTTA 
ATTATATAAA TTAATCTTTT TTCTCTCTGA AAAAAAAAAA AACAAAACCC 
NNGGACCCNA ANTTTAACCT ACCCCCCAAA AAGGNTNACN NNCCCGGGCC 
GNNAACCNCC CNNCCCNTTT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1165222 [Map]; Strand: c
  - AT1G04340.1 - [+] show detail - HR-like lesion-inducing protein-related
    Distance: -371; Region: promoter
  - AT1G04350.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 11-3526-1 - 3-prime edge
```
TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTCTTCTTCT TCTTTTTGTA TATGTATGAA GCAGCTTTTT GTGAATGAAT 
CTTCGAAATA GGTTAAAGAA ACAAAAATGG AGACCAAAGA ATT
```

AT1G04340.1

Model type: Protein coding
Short Description: HR-like lesion-inducing protein-related
Computational Description: HR-like lesion-inducing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: HR-like lesion-inducing protein-related (TAIR:AT5G43460.1); Has 168 Blast hits to 168 proteins in 33 species: Archae - 4; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04350.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator Summary: encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59540.1); Has 8112 Blast hits to 8080 proteins in 977 species: Archae - 0; Bacteria - 1066; Metazoa - 116; Fungi - 819; Plants - 4883; Viruses - 0; Other Eukaryotes - 1228 (source: NCBI BLink).
Link: InterPro Scan - TAIR