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11-3585-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1057202 [Map]; Strand: w
      • AT1G04090.1 - [+] show detail - Plant protein of unknown function (DUF946)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-3585-1 - 3-prime edge 
    GTTCCAGTGG AGACATTTGT AACCCAACAT TCTTATCTGA TCGCGCGAAA 
    CCCTAATTAA TCAGGAAGGT GGAAATATGT CAGCTTTGTA GCATCTCATC 
    ACTTGTTTAC CATTTCCTTC GGGTAATAAA TTAAAGATTT TCCTCTTATT 
    GAGAAAACCA AAAAGTCATG AAACTGTTTT ATCCAATTCC ACACATCAGC 
    GAATACCTTG GGGAAAAAGT AACNTTTGGT TTTTGAAGAA ACGCCACAAG 
    AAAATGTGTT TTGTTTCAAA ATATATCTAA AAATATGTTT TGTTTCAAAA 
    TATATCTAAA AATCCTCGCA TATTTACCCC ATAAGTTTTA AAATTGTATA 
    TTTTTCCCAT TAAGTAAGAA TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1057318 [Map]; Strand: w
      • AT1G04090.1 - [+] show detail - Plant protein of unknown function (DUF946)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3585-1 - 5-prime edge 
    ACTGGAACAA TCTTATAGAT TCACCGCCAT TAAAGGACCC TGAAACCTTC 
    TCTCTTCCTT CTTCCATTCC CCATTGGCCT CCAGGTAACT CCAATTCCAT 
    TCAATTCCCG ACTTCTCTTG TCAACGATTT CGAATT

AT1G04090.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF946)
Computational Description
Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT5G43950.1); Has 349 Blast hits to 319 proteins in 89 species: Archae - 0; Bacteria - 23; Metazoa - 11; Fungi - 104; Plants - 206; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR