Home
Mutant Lines
11-3603-1

11-3603-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1166988 [Map]; Strand: w
  - AT1G04350.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: 220; Region: intergenic
  - AT1G04360.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 469; Region: intergenic
Flanking Genome Sequence: 11-3603-1 - 5-prime edge
```
TAGCCAACCA AGGCAAACCT GCAACCATTC GGTACTTAGC TCGCAGAAAA 
CTGATCAATA CTATCTTCAC GGTCTGAGGA TC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1166872 [Map]; Strand: w
- AT1G04350.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 104; Region: intergenic
- AT1G04360.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 585; Region: intergenic

GTTGGCTACA ACAAGCAATC TTTGATCGGT TTTGTTTGGT TCAATAACAT 
TTGCTACTGG TTTAGTTTGG TTACTGATTA TACTTTAGCT TGTATATAAT 
TCTTTCTTTT GGTATTGCTA GTTTCAATTT AGTCAAGAAA CTGTGATTGA 
CAAGATGCTG ATCAAGTTTG AACCTTTATT CCCAATTTAA AGCATTCACT 
AAAATTATAA ACACACACAC ACACACCTTT CTTTGTTGTT TTTGTTTTTG 
GTACAAAGGA AATGGTTTAC TTATTTGTCA AGATCTGACA ATTGGACTAG 
TACCTGAACC CAATAGATGC ATGAAACGAA CCAATATCTT ACAATAAACT 
TGAGATGATT NACTCTTTCA ATTGTTTTTT TCTTTCATAT CTTGTAATGC 
GACAGATACG ATGTTCCATC GAGGCCTTTC TTGAAGTATC CCTCTGTGTA 
TTCTTTCAAG TCGATGACTC TGTATTTTGA AGGGTTTTCT TCAGAGAGAA 
GCTCTTTGAT TGGTCCATAA ACAGTTGAAT T

AT1G04350.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator Summary: encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59540.1); Has 8112 Blast hits to 8080 proteins in 977 species: Archae - 0; Bacteria - 1066; Metazoa - 116; Fungi - 819; Plants - 4883; Viruses - 0; Other Eukaryotes - 1228 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04360.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink).
Link: InterPro Scan - TAIR