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11-3632-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30142662 [Map]; Strand: c
      • AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -16; Region: promoter
    Flanking Genome Sequence: 11-3632-1 - 5-prime edge 
    CGTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TTGTCAACTT ANAGACCAAT AATATATACA 
    CTTATCTTTT ACAGTCTAAA TTTAATTATG CGGCGTTACC ATTATATAAG 
    ACTCTGGTAG ACTACTCTCA TTATATACAT TATAAAGATA CTTGATGAGT 
    GGTTCTTGTT TAATGGAGTT TTAAATTTAA AAATATTTGG TAACCGAGTG 
    GATCATCATG TTATTGAGAA GCACATCTGC TCCGATACTG AACTCGTGGC 
    TTCCACAACA CTGCTCGAGA GAATCGTCTC CGGAACCGGA GTCACAGCTC 
    TGGCGCCGGT CAACATCATT GTCTCTTTTC TCATCAAAGT CCATAGATGG 
    ACACACTGGG GAGCAGCTGC ACCAAGCTCT CTCTGACAAC AAGGAGATTA 
    TTATTCTTAA ATCAAAAAGC AACGAGCACA GCTACAAAAC TCCAACATCA 
    AGCAGGCAAC GCAGGTCATC TTTAGATGAA ACACGCTACA CAAAAAAGAC 
    TTTGGATCGG TCATCACCTT TCTTAGTGGA GAGGCTCTTC TCGAGCTCTG 
    GACAGGGAGA TAAGGCCAGT AGTAATGATC GTCTGGAGAC TCTTGTGAGT 
    GGTGGTGGTG GCGGGATGGG AGGCAGCGGC GGCAATATTT GTAACGGCGG 
    CGGTGGTGTC GGTGGAAGTG GTGTGGACNG CGGTAGGAGT GANGACGCTA 
    CCGACACGTA TTACCGGGAG ATGATCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30142665 [Map]; Strand: c
      • AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -19; Region: promoter
    Flanking Genome Sequence: 11-3632-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    CCAGCCAAGT GAAAAAATAG TGAAATTATT CTACGGGACC ATGGATTGAT 
    AGAAAAAGAT CGGATTAAAA CACAGCCGCT AGTACTTTGA CACGTTGACC 
    ATAACCACAT GGGCAAATGC GGGACCCACC TTTCACTCTT TTGTCGACAT 
    CATTACATAG TAGTTTAGTA TCCTCACAGA AAATTGACGG TGCNTGCGTT 
    GCGTATGAGA TGGAGACAAA CTCTAAATGT AACTGTCAGC TACAGTGTTA 
    TCTTGGATCG AGACAACAGT CGACACGTTT AAGAGTTCAG CTGACGAATG 
    CCGACAAAGA CGGAGACGGA GACGTTATAC GGCAAGCGGT GAGATCTCTC 
    TCAGTGCTTC ACATTCATCA TCACTCTCAT GCTTTTTATC AACTACGGGC 
    TCTGTTCTTT TGTCACGCTA TATGGATTAA ATGTATTCGG TAGATAATAA 
    CGTTTTGAGG GTTTCTTTCG AAGGTTTGAG AAGATAAAGA TACGTGCATG 
    ATCCACTTTA CATAAGATTC TCTAGGATCA TTTATGGAGC TGATAAATAC 
    TGCATTACGA ATCTGATTTA TGAATATTAT TATATGAATC TGATTGGTCC 
    TATATATCCC ATTTTTACAT CAACATAAGG AATCACTTGG ATGTGATGCC 
    TGAGGTTGAA ATGTTCGATA TTCAATTTCT TCTTATTTTG CGGAGGCGCA 
    GTCGAGTTAT TCATAAATGT AATTAANA

AT1G80130.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR