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11-3715-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30129126 [Map]; Strand: c
      • AT1G80080.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G80090.1 - [+] show detail - Cystathionine beta-synthase (CBS) family protein
        Distance: -978; Region: promoter
    Flanking Genome Sequence: 11-3715-1 - 5-prime edge 
    GNTGAGGNNG NAAAGAGGGT AACAATAAAG GGNNNGANGA GNGNGTNCGG 
    GAGCNNATGG GCNAGCCNNN CANAGGGNTA NANAGNTNGN ACNAGNACGG 
    CGCNGCCNNG NAANGTGGNA ACGACCAGGC CGGGGGNGAA AGGACGCGTG 
    NNACATAACC CNGACGANNA GGGCGGGCTC ACCAAGNTGA ANGGCNNNNA 
    TTTGNANAAA AANCACCTGA ACGGCTCCAT TCCCTTGTCG TTCAACCGGT 
    TCTCCGGTTT AAGATCGCTT GATTTGAGTG GTAACCGGTT GACTGGTTCC 
    ATTCCCGGTT TTGTTCTTCC GGCGCTGAGC GTTCTGGATT TGAACCAGAA 
    TCTTTTAACC GGACCGGTTC CACCCACACT CACAAGCTGN GGATCGNNGA 
    TCAAAATCGA TCTTAGCCGA AACAGAGTCA CTGGTCCTAT CCCAGAATCG 
    ATNAACCGGN TCAACCAATN ANNGCTTNNG GATTNGAGCT ATAACCGGNT 
    ATNAGGGNCA TNCNNGNNTN NTNTNNAGGC CTAAACTGTN TTNNAGCTAC 
    CAGNCNGGGN CGNNNANANG CGNGNNNNAN ANNNGGGNNN NNGNNNNNGN 
    GGGNNNNNGN NNGAGNNNNN GNNNNGNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30129235 [Map]; Strand: c
      • AT1G80080.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G80090.1 - [+] show detail - Cystathionine beta-synthase (CBS) family protein
        Distance: -869; Region: promoter
    Flanking Genome Sequence: 11-3715-1 - 3-prime edge 
    GTACTTATAG ACGTNANATC GTTGTGNATC ACAAGGNNGA NACGCCGTGT 
    CGTCTGAGAG CGCTCCGAAC GACCGATAGA CCACAGTGGT AGACTGTTAT 
    CCTGGTCCGG CATACACTCG ATCCCTGTGC CATCTCCCTC GGCAAACGTC 
    TGGAATCGCA GGCAGCCCAG TCGTTGCCGG TCANCACGCA TAATGTCGTA 
    GACGGCGTCT TGCTCGTCAG GCTCCGTGCG AGCGCCGTCA TTGGTCATCG 
    TGAATCCAGT TTGTGGGCCG TCGATCAGAG CAGATGGGGC CGTCGAGTCG 
    GAGGTGATCA CAGTGAAAGA TCTGACCAAC GGAGAAACTA TAGACAAGAC 
    AATGAATATT TGGCGGAAGA ATT

AT1G80080.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.
Computational Description
TOO MANY MOUTHS (TMM); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 29 (TAIR:AT2G42800.1); Has 88991 Blast hits to 28047 proteins in 1079 species: Archae - 16; Bacteria - 3330; Metazoa - 23111; Fungi - 805; Plants - 56845; Viruses - 0; Other Eukaryotes - 4884 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80090.1

Model type
Protein coding
Short Description
Cystathionine beta-synthase (CBS) family protein
Computational Description
Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR