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11-3734-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24623428 [Map]; Strand: w
      • AT5G61210.1 - [+] show detail - soluble N-ethylmaleimide-sensitive factor adaptor protein 33
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-3734-1 - 5-prime edge 
    GTTCTGAGTC GTCTCCGCGT TAAATCTTTT CCCTTTTTGA TCCTTTCTTC 
    CTTTCTTCTT CTTCTTCTTC GCATTGATTT GGTCCTCCTT CCTCTTCTAT 
    TCTATTCATT AAGAACCTAA TCTTCATCTT CTCCATCTTC TTCTTCACGG 
    ACTCCACTTC GCTCATCCAG GTAACCACAA TCTGCTCTCT ATCTTTTGCT 
    TCAAAATTCT CAGTTCCTTT CTTCTCAATT TCCGTCTGCT AGATCCTGGG 
    CTTTCGATTT GTTCCGTTCC TCTTCTGCGA TTGTTTCGTT CCAGAGAGAA 
    TTATCGAAAT AATTAAGCGA ATTTTGTGTG TGGTTTTCAT AGTCTTGGGT 
    TCTTTAGCCG CTACATATAC TCAATTATGC CCAAAATTAG GTTTAAAATT 
    GATTAACTAA AACTTATACT TTTTGGTCTC GTCTTATGTT ATCGTTTAAA 
    TTGTTCTTAG AAGTGAAATC ATTCGATGCT ACGTTTTTGA CTTGTTGCTT 
    TACTTTATCT ATACCTTTGA TTTGATCAAC TTTTCTCTTA NCTTACAAGT 
    TANAATCAAA GCATNAATCC TGATTACTGN NNNGGNTNCT GCAGGAAGGG 
    NNATTANTNG NAACCAANCC NAGGGGNNNC NTTTGTTNGA ANCAACAANC 
    TANNNNCCNG NCCGNCNNC

AT5G61210.1

Model type
Protein coding
Short Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33
Curator Summary
membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation
Computational Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR