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11-3756-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 215021 [Map]; Strand: w
      • AT2G01470.1 - [+] show detail - SEC12P-like 2 protein
        Distance: -549; Region: promoter
    Flanking Genome Sequence: 11-3756-1 - 5-prime edge 
    TTTCTCATCA TTTTGTTCCT CCTTAAATTT GGCCCTTTTA TAACTGTCTT 
    TATCTTATGT CTAATCGTTT TCTGTGATTT ATATCTTTGT ATTTAGTGTG 
    CTACTTATAT AAGTTAAAAC TCTACACGAA TAAAACTCAA GTAGTGAGAT 
    TTCGAAGATC AAATAGTTTG TAAACTACGA CGAAAATTAC AAAAATTGCA 
    ACTTGCAAGT GTCACTAACT ATAAATCACG ACATTCTTCC CTTTGGAAAA 
    ATCTTCATTT CTCGACAAAA AATTTAGGCT TCCAATGATG ACCACAAAAA 
    GTGGAAAAAA AGGATTCTCG TTTCTGAAAC GTTTGGCTTC CGCGTTTTCA 
    TTACTGTTTC TATGCTAGAG AGTATTAGTG CCTTGTTGTC ATGGTCATAT 
    ATCTCAATTG AAAATCTCCT AAAACTATAT ATTAAATGAC ATATAGTATT 
    TTACTAAATT TAGGAATCTT TTCATTTATA TAGTAAAAAA ATAAAATAGT 
    GTCGCTGTTG CCAACCACTC TCTATCCATC TNAGTTNGCA CATGCNACAC 
    AACCACNTGC TATTGCTAGN GAAACTCTCA TACTGGNNAA TTAACTCCCN 
    NANTNTTTNT NNNNCNAANG ANNTNTNCNN TNNAAAAAAA AAANNNNNNT 
    NNAAAAAAAA NNNNANAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 214905 [Map]; Strand: w
      • AT2G01470.1 - [+] show detail - SEC12P-like 2 protein
        Distance: -433; Region: promoter
    Flanking Genome Sequence: 11-3756-1 - 3-prime edge 
    ATGAGAAATA ACAAAACTTT CAAATTTCAA CAACATGTAT CGAAACGAGT 
    CACTGAAAAA TTATTATTCC ACCAAGAAAC CCACTAGCTG ACTCAGAGAC 
    TTCCTTTGCA TTTTACTCGT GCAATGTACC AAGGATGTCC TCGTCCCGAA 
    ACAGATGATA CCTACGTCAA AAATCACCAA CACATCGATT TAAGAATTTT 
    ACACAACTAT AGGGTGTTTT TAGATCAAAT CAATAGTATT GGGGTGATAA 
    ATGAAAATAT TATAAAAATT AAAGGATC

AT2G01470.1

Model type
Protein coding
Short Description
SEC12P-like 2 protein
Curator Summary
Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.
Computational Description
SEC12P-like 2 protein (STL2P); FUNCTIONS IN: nucleotide binding; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: integral to endoplasmic reticulum membrane, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6374 Blast hits to 3814 proteins in 364 species: Archae - 22; Bacteria - 2789; Metazoa - 1016; Fungi - 1422; Plants - 400; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink).
Link
InterPro Scan - TAIR