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Mutant Lines
11-3802-1

11-3802-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 16374567 [Map]; Strand: w
- AT2G39210.1 - [+] show detail - Major facilitator superfamily protein
  Distance: -6292; Region: intergenic
- AT2G39220.1 - [+] show detail - PATATIN-like protein 6
  Distance: 329; Region: intergenic

ATACGTTCTA TTCATTACGG TCCCAAGTTC ACATCTTTGA ACTTACGTTA 
AATCACATCA TTACAAAAAG AGTTTTGGTC TCCAATCAAA TTAAATCTCC 
AAAGAGATTT GGTCTCATTG CACATCTTTT CCTTTTTAGA AAATTCCAAA 
TGAAGAATTT GCTTCTGAAT ATGAGAAAAT TCGTATCAAT AAATTTATTC 
ATTAATCTAC AAAAGGAAAA AATTGAAATG CATCATATGA TGTTTTGCAG 
AATCAATGAC TCTGTAACAA ACAGAGACTA AAAGGGTCCT TAAAGGTAAG 
TTGGCAACTA TCTTCTTGTT TAAGAAATGT GTTAATCTTT GTGAGTCAAG 
GTAATTAGGC TAAACTTGTT TTGTTGATTA GCCTTGACGC TCTCTGCATT 
CCAAAATTTT GTTGACGAAG CTCTTTTAGA GTCAATAGAA AATAACAATT 
CAGTAAAACA AAAATTACAC ATATCTTTAA GATTTAATAA AAAGCCTAAT 
TCGAATATAA TGTTGCTTTC TTCTGGACTT AAACACAAAT CTATACAATT 
TAAAAATATT CAAAACATAC AATCAATATC CTTGAAAATG GTCTGTTGAT 
CGACTCTTCT GTCGCCGGAT TGCTTGAACG CTACAGTGGG AGCGATTCTA 
CAACTCCTCC TCTGGGGGTT CTAGCACTAG TTCACCGGCT AACCAATCCA 
GCTTCT

3 prime edge [+] show sequence

Chromosome: 2; Position: 16374490 [Map]; Strand: w
- AT2G39210.1 - [+] show detail - Major facilitator superfamily protein
  Distance: -6215; Region: intergenic
- AT2G39220.1 - [+] show detail - PATATIN-like protein 6
  Distance: 406; Region: intergenic

GAACGTATCA AGAAGGCGGT TATGAAATCA TATTCATTGG CGCGTCCAAT 
AAAAGTCACT TTCTTGATTN CAAATATATA TATTTTTCAA CAACATGTGT 
ATTTNGCTGA TTTAATTCCG GGTAGTGACA CANCAACGAA TATTATTACA 
AATTGACAAT CCACTCTATG TCTTAATCTA GTAAGTATTA TTTTATTACT 
ACAAACTGGA GCTTGACAAA ACTTGCCAAA AAAGAAAAAA AAATTGGAGC 
TTGACAAACA AAAAAAGATG ACTACAAATT GGAAAGTTCG AAGGCCAAAA 
AAAAAAANCA NGGGTNGNCC CCGTTTTNGG NCCCGNNCTN GGNNAAANNN 
CCAGGGCGGG GANCGTNGTT TTTTTTTTTT AAAAAAAAAA NGGGNANNNN 
NNNTNNTTNG GNAANGGGGG GGGGNGGGCC CAGGGGGNNC NNNNNNTTTN 
NNNTTTTNNT TNAAAAAGNC CCCCCNNCAA AAGGGGGGGG GNCCAGGGNT 
TNAAAAAAAN TTTTGNGGNN NNNAAAAACC CCCCNAAAAN NGGNANCCNA 
ANGGTTTTTN ACCNTNAAAN NCNGGNTTTT GGNNGGGNAA NTNNNNNCCN 
GGGGNNGGNN ANANNNNGGN NNNTNTAA

AT2G39210.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G39220.1

Model type: Protein coding
Short Description: PATATIN-like protein 6
Computational Description: PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
Link: InterPro Scan - TAIR