1. Home
  2. Mutant Lines
  3. 11-3816-1

11-3816-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18055691 [Map]; Strand: w
      • AT4G38620.1 - [+] show detail - myb domain protein 4
        Distance: 692; Region: intergenic
      • AT4G38630.1 - [+] show detail - regulatory particle non-ATPase 10
        Distance: 1439; Region: intergenic
    Flanking Genome Sequence: 11-3816-1 - 5-prime edge 
    GTNANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC ATATACTGTA TATCCATATA CCACATAATA TATTTATGCA 
    TGCATGCATA TAAAAATATG TATAGGAGTT TCATTGAATG TAGCCACATG 
    GTTGAATTTA GAAAGAGTAG CGACTCGTAA ACTTTAAACA TTGTTCTATC 
    GTAAGATGCN TTGGTAAAAT CGGTGTTGTA CATGTTCCTT CGTTGATATC 
    CTCTCCTCAA CACTACAAAA ACCCTCTCTA GCTACTACAT TAATTATCAT 
    CTCAAATCCC AATAGAGCAG TATATTATTT CCTCGTATAT ATTTAGATTT 
    AGTTTTAAAA TTGATCAAAT GGTTATATAC TCCAGTTGTG TGTTTGTTTT 
    TTTGTTTTGG CCAAAAATTG GTAAGATCTC AAAAACTGGT ATAATCACTT 
    GAGAAATTAT ATGATCACCA AATGACAAGT TGTTGTCACT AGCACTGGGG 
    CTTGATATAT ATCATATTCT GATGAAGATA CAAACTCAAC AATAATGGAA 
    TCAATAAGAG TTTTCTCAGG TTGCATCAAC TAATGAAACA AATTTAAAGT 
    TGGAAAAAAA AACAAAATCA GTTGAAGTCT AAAATAAAGT TGANAACGTT 
    TGATTAATTT CNAACATCGA AATTTAACAG TGGTTGGGTA AATATTATGA 
    AAGTGAAGGA ATAACAAAAA AAACNTGTAA AAGTTGATAN AGGANGAGGA 
    TTTTTTGGAA ATNAAAAAAA NGGGAAAGGA GGANNGGNNA AAACTA

AT4G38620.1

Model type
Protein coding
Short Description
myb domain protein 4
Curator Summary
Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.
Computational Description
myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38630.1

Model type
Protein coding
Short Description
regulatory particle non-ATPase 10
Curator Summary
Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities
Computational Description
regulatory particle non-ATPase 10 (RPN10); FUNCTIONS IN: peptide receptor activity; INVOLVED IN: in 19 processes; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), Ubiquitin interacting motif (InterPro:IPR003903), von Willebrand factor, type A (InterPro:IPR002035); Has 677 Blast hits to 665 proteins in 240 species: Archae - 0; Bacteria - 16; Metazoa - 271; Fungi - 148; Plants - 120; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).
Link
InterPro Scan - TAIR