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11-3824-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 59116 [Map]; Strand: w
      • AT1G01120.1 - [+] show detail - 3-ketoacyl-CoA synthase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-3824-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA GGAGGATTTT GGTGAAATGA GGGCAAGTAG 
    GGATGGAGAG ATATATAGAG TGCAAGAAAG ATAAAAATAT TTTAAAGATT 
    AATAATAGTA ATGACTTAAC AAAAAAAAAA AAAANNGGGA NNANTTTCCA 
    ANTTNANGNN GGGGGGGNCC CAAAAAAANC CTTTNCCCCN NCCCCCTTNT 
    NGGGNCCCTN NNTTTNAANT NNNGGNCCCC CCNNNTNNNT NCCCNCCCGG 
    GCCCNNAACC CCCCCNNCCC CNNNTTNAAA AAACCCNNCN NNANNCNTNN 
    ANNCCNTTGG GGAAACNAAA ANTNGGGTTN NNTTTTTTTT CCCCCNNNNT 
    TTNGGGCCNN NAANNCNTNN TTTTTGGGGG ANCCCAANTT TTTTTTTTTT 
    NNAAATTTTN NAAANNNNCN NNNCNTTNTT NNTTTNACCC CCCGGGGNCN 
    NNANCCCCCC NNNCCC

AT1G01120.1

Model type
Protein coding
Short Description
3-ketoacyl-CoA synthase 1
Curator Summary
Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.
Computational Description
3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR