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Mutant Lines
11-3936-1

11-3936-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1176238 [Map]; Strand: c
  - AT1G04370.1 - [+] show detail - Ethylene-responsive element binding factor 14
    Distance: 660; Region: intergenic
  - AT1G04380.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: 683; Region: intergenic
Flanking Genome Sequence: 11-3936-1 - 5-prime edge
```
TCTATGGTGA TCCTGATTCC TGATAGAAGC ATGGAATTAA CGCCGAAGTC 
TCTCATCTCA TCTTCATGGC CGTGTGGTGT GGGTGATTTT CTTTCTCCAC 
GTATTTATAT TTTGTCTTTA AAAACTCATC TATCAACTCA ATGAATAATT 
GTCCCCACAA GTTACTAAAC TCATCAGTTG CTTATAAAAA CTATTTTCAA 
AATGTACATG TATATATGCG TCTACATATG CCTTTCCAGT ATAATTCATG 
AATGGAAGAG CAATAACAAG CAATGGTAAG ATGAATT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1176316 [Map]; Strand: c
- AT1G04370.1 - [+] show detail - Ethylene-responsive element binding factor 14
  Distance: 738; Region: intergenic
- AT1G04380.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 605; Region: intergenic

CTTAAAACGG CNGAGGTATT TTACCGACCG TTACCCTAAC CATAGAAGCT 
AGAACCATAT ACTTTAAAGG CATTAATTTT TGTTTTCCGT CCCAAGATAA 
AAATATTAAT ATAACAAAAA AAAACATTTT AGTTGGAAAA TTATATAGAA 
GTTTTTAATT AAAATTAAAA TGATAAAATA CAATTTAATA AAAATATAGT 
AAAAAAAAAC ATAGTTTACA TNCAANCATG AATAAATAAA TTNGGTTCAG 
TTGCNCTAAC TTTTAACTTA AAATAATGGG GGCTCGGCTT ATAACNCAGA 
AAACCCTTTT CGTCCCCACT AATCTTTTCT TTGATTGCTT CAATGGNGTC 
GTAGCTTCTG GGCCCNCCGG CGGGTAGCCA CCGTCAGTCA AACCTTCTAG 
TCTAATCACC TGAAACCCCT TNTCGCCCCC CCCGATAGGT CATAGGTCAA 
ATCGGANAAC CGTGTNGACC CCTGAGTNTN CNTCGAGGNG TTGTAAATTG 
NTTTCCACAA GGGCNGTTTT TGNNTGNTTC NTGAAACCAT TTCCAAACCC 
CTNGGGGGNA NATTTTAAAA NNCCTAAANC AGGGNCTAAA TCTGANGCTC 
TGACTAGGTA CCAATTTGGA NCAAATTTTN TTGGATAAAG ATNGGTGGAT 
TCCCCGGGGG CCCCCGNNAA GGANTTAAGT NAACCAAAGG TTGGATCTTN 
ANGATNCNAT TNTAACCCCC ACATGGTTTN ACCAAANNNN CCCCCCCCCC 
NCCCATTTGG GTNTTATCTT TGGNCCCAAG GCNTTTTGTT TTGNNNGGTG 
NNNNCCCCNA NAA

AT1G04370.1

Model type: Protein coding
Short Description: Ethylene-responsive element binding factor 14
Curator Summary: encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Computational Description: Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04380.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator Summary: encodes a protein similar to a 2-oxoglutarate-dependent dioxygenase
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: 2-oxoglutarate-dependent dioxygenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G04350.1); Has 8121 Blast hits to 8082 proteins in 999 species: Archae - 0; Bacteria - 1115; Metazoa - 117; Fungi - 760; Plants - 4878; Viruses - 0; Other Eukaryotes - 1251 (source: NCBI BLink).
Link: InterPro Scan - TAIR