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11-4015-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 171974 [Map]; Strand: c
      • AT1G01460.1 - [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase, core
        Distance: 809; Region: intergenic
      • AT1G01470.1 - [+] show detail - Late embryogenesis abundant protein
        Distance: 172; Region: intergenic
    Flanking Genome Sequence: 11-4015-1 - 5-prime edge 
    GGGCACTGCA ACTGGGCCCC ACGGTACAGN CTCCNCCTCC GCGCGCAGGN 
    TCCCNGGGTN CTCGACCATT CTATCGCCTN ATTTCTANNT ATANATCTNC 
    TANAAAATTG AAATNNAATA TACATGCTAG AGCGGAAATA NAAAATAAAA 
    ATAATAAATA AAAAGGTAAN TGATTTGATG CTTATATGAA AGGCAGATGA 
    AAGTTAATCA CCTGCGTTGN GAGCATAGCG GAGAAAAGCC GGNANAAATG 
    GAAGAGATNA CCANNCCGGG CCGTTNNCCA CCCGGGCCCN ATAACAAGAA 
    TCGAAATCAC AAGTATAATT AAGTAACCTG CGTTTGTCAA TCTGATGATA 
    CGTTNGGTAA TACTCATCCG GAGCGATATC GAGAATGAGC GTTTTGAAGT 
    TGCAAAATCC GTAATCAGCG GAGATGTTCT GAAATTAAGT AACAAGGATC 
    AGTGAGAACA AAAGATGATG ATTCATTCCT CCTCCACGTG TCCCCCTTTC 
    TNTGCGATGC TTCCACTTGT CCCCCACTTA TTCGCTNGCT TAAAACTTTT 
    TGGAANAAAT TAGAATATCC GGNNGGATAA ATCAAAACTG GGGTCGGGNG 
    AGATATTCAA ATNGGNTTAC TGGATTCGCT CCCGTNCGTN TGGAATTCTA 
    ATTNCANNCN GGNNGGNGGG AATTAACTCC GGNTNNTCTA AAATTNGNAA 
    G

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 172045 [Map]; Strand: c
      • AT1G01460.1 - [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase, core
        Distance: 880; Region: intergenic
      • AT1G01470.1 - [+] show detail - Late embryogenesis abundant protein
        Distance: 101; Region: intergenic
    Flanking Genome Sequence: 11-4015-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG GGNCCATAAA 
    ACGGNAACGC NANTAATCAG AACAAAACAG AACATATCTT TTGGTTTTCA 
    TATCAAACCA AATTGAATTA TAAGATTTTG CCTTGGATTT TGGTTTGGTT 
    TCTTATGCAA CTTCCCAAAA GAACTGATCT GTCCAAACTT ATGATATGGC 
    AAAATAACAT TTTATTAGTT ATAGCAAACC CAACTTATTA CATTACGATC 
    ATCACCATTC ACCATCATAA CGATGTGGGG TCTTATATAT AGGTTTTGTC 
    GATCAGAAGA AATCTTTAAA AGTAGGAAGT TTGATTTCTC CCTTACTAGA 
    GATAGGGATA GTAAATTCCC CTACAACAGG AAGGTCGATG GTTAGACCGA 
    TTTGGAGCTC GTAGTCAATG TCCCAGTCCA CACCAACGTC TCGANCCAGG 
    CCNGNCNGTA TACNATACGG GCCCACCACG GGAATATCAA GAGCCGTCAT 
    GTCCTTAGCT TTCAGAGAAC CCGGGTCCGG TATCTTCCCC TTTCCAATCT 
    CCCTGTTTAC AAATAATTAG ATC

AT1G01460.1

Model type
Protein coding
Short Description
Phosphatidylinositol-4-phosphate 5-kinase, core
Curator Summary
Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.
Computational Description
PIPK11; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol phosphate kinase 10 (TAIR:AT4G01190.1); Has 2109 Blast hits to 1621 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 980; Fungi - 317; Plants - 416; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01470.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein
Curator Summary
Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.
Computational Description
LATE EMBRYOGENESIS ABUNDANT 14 (LEA14); CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT2G46140.1); Has 340 Blast hits to 340 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 329; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR