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11-4032-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15535058 [Map]; Strand: w
      • AT2G36985.1 - [+] show detail - DVL family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4032-1 - 3-prime edge 
    GNNNNNGNGG NNGGNNNNNN NNNNGNNNNN NNNNNNNNNN NNNNNNNCNT 
    TNNNNNNANG ATTTGTANAN GGANAGAAGG TNTTNTANCG CACCGCATAC 
    NGCACCGNTA CGATCCGTGG NTGCNCGGGC TCGAAGCATA NACCACCANG 
    GCGNGAGCAC ATCNCAGACT NCTTTCTTAT TATTGGATTG TTATCTTCAT 
    ATTTTAAAAA TAATTTATCT ACATATTAAT GCGCATACGT ATATTAGAGA 
    AGATTGAAAA TTGTGTGATN GTTTTGTNTG NNGAAATGGA TAGCTTNNGG 
    CTACGTCTTC CANTGGNNGT GCGNTTCNAC TANCCTTNTC AGGATTATAT 
    AAANNTGGTA ANTAATTACT GCACCTAGGC TCAAAAAGAT TCTGAGTTGN 
    GACNAAANCC AAACTGCNAG NACNCGANTN CTACNCTANN NCCNTATAGT 
    AAAACACTNT TANNACATTA ATACGCTTCT CATACTANTT NANNATNNNT 
    NACAGACNAA CCACTACCAT GNNNTTNGGC TGGNAAAAAN GGNNCGATCN 
    ATCAGCTNCA CAANCGNGCA CGTGTANNTN CTCCATATTN TTTNANCCNN 
    GNNNCANNAN ATCNAGGCAC AATNCCNCNG TCGCNGGGNG NCNGTCCNNC 
    ANGNGANANC TAACTTCTAN CAAAGGNCNA CNNNNNNNNT CANGCNGGNG 
    NGAANNCNNT NNNCGNCATA CTTCTNANAA CATNCACNGA ANNNCCNATA 
    NTCNTNCACC NNATNGNAAA GTNATNNTAT NGGNNAANNA NANTTCNCTN 
    NGANATNCNA NTAGNNANGN CCNGCCCCCC TTNCCNNNNT NNCGGNCNAN 
    NTACCNNTCA CNNANNNAAN CCCCCACCAN NNTNCNCNNN TACACCCCNC 
    CGACANCATC TCCATNCCN

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15535062 [Map]; Strand: w
      • AT2G36985.1 - [+] show detail - DVL family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4032-1 - 5-prime edge 
    GGTANNACNG CGAACANTGN NNANNNNNNC TCTNTGCGCT GCGCNGAACA 
    TGGNCTGCNN NCCNGCCNNN ANGCNTNGCA CTGGATCACA CGTGCCATTC 
    TCCTCCGGTG CCATTGATTT GTTTCTGCTC TTAGTGAGTC CGACCAAAAT 
    ATAAAAAAGT GCAAGAAATG GAAGAGTTTT TTTTCTAGTT AAAAGGCTTA 
    AGAAATGGAA GAGTTCTTGT GAGCTTTATA TTGTGTAGTA GAGGTGAAAG 
    AGGGACAAAG ATAGAGAGTT TAGTATATAC TATATAGTCG TCAAGTGGAG 
    GGGGCAAAAG CATTATCAAA AACCCAAAAG TATGTTTCTT ACAAATTAAA 
    ACCTATATTG GACTATGAAA CAAAACCGCT ACATATATTT TTTGAGTTTA 
    TTCTTCTTTA GTTAATTTTA GTTTGTGGAT NGGTTTTAAA AGCCGTTAGG 
    TTTANAGGGA AAATACGTTT GAAGTTTTTT ATATTATTCT TAATTNGTAA 
    TTAGACAATG TTCAAAATAT ATATGTACGT TGTANATAAA TCTTATTGNG 
    TGTNGCTTTT GAATTTTCGA ATACAACTTA AAATTTAATT AAATCTATTT 
    ATCTTTTGAT AACTAAAATC CCGAATNGNA ATTTAAACTA ATCTCTANAA 
    CCTATGAAAT GATGGNATTC TTATTTTAAG GGGTNCATAT GAGTNAATGA 
    CCAACCNTGA TCAAAGNCCA NGGG

AT2G36985.1

Model type
Protein coding
Short Description
DVL family protein
Curator Summary
Encodes ROTUNDIFOLIA4, a member of the seed plant-specific family of small peptides, RTFL (ROT FOUR LIKE), characterised by the presence of a 29-amino acid domain: RTF. Expressed in shoot apices, young leaves and flowers. Involved in controlling polarity-dependent cell proliferation.
Computational Description
ROTUNDIFOLIA4 (ROT4); CONTAINS InterPro DOMAIN/s: DVL (InterPro:IPR012552); BEST Arabidopsis thaliana protein match is: ROTUNDIFOLIA like 1 (TAIR:AT3G53232.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR