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Mutant Lines
11-4046-1

11-4046-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1667609 [Map]; Strand: w
- AT1G05580.2 - [+] show detail - cation/H+ exchanger 23
  Distance: 0; Region: exon3 (CDS)
- AT1G05580.1 - [+] show detail - cation/H+ exchanger 23
  Distance: 0; Region: exon3 (CDS)

TGCGGAATGG AGAGACCGAA CAGGAACGCC CCGGTTATGG AGTGGACCCC 
GCATGCGTCC GTAATCAGGC CGCATAGGAC CACACCTCCT AAAATGAACC 
AAACGTGAGT GTCTCCGACG TGACCTGCCT TCACGGTCTT CGCGAAGATC 
CATGCAATTC CCGGACGGAT CACAAAGATG CAGAGGAGGA CGAAGATTGC 
GGTGGTGATT ATCACGAACG GCATCATTTT GTTCCATGTC CCTTTTTAAC 
CACCAACAAA AAAAAAGAAC AACGAAAAAA ATCATCANAA TT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1667493 [Map]; Strand: w
  - AT1G05580.2 - [+] show detail - cation/H+ exchanger 23
    Distance: 0; Region: exon3 (CDS)
  - AT1G05580.1 - [+] show detail - cation/H+ exchanger 23
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 11-4046-1 - 3-prime edge
```
ATTCCGCACG ACCACATCAT ACGTAACATG ATCGAGGAGA AGCTCCATGA 
CTTCCTTTCC GGGATC
```

AT1G05580.1

Model type: Protein coding
Short Description: cation/H+ exchanger 23
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: cation/H+ exchanger 23 (CHX23); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 21 (TAIR:AT2G31910.1); Has 6204 Blast hits to 6178 proteins in 1654 species: Archae - 257; Bacteria - 4841; Metazoa - 0; Fungi - 132; Plants - 575; Viruses - 0; Other Eukaryotes - 399 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05580.2

Model type: Protein coding
Short Description: cation/H+ exchanger 23
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: cation/H+ exchanger 23 (CHX23); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 21 (TAIR:AT2G31910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR