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11-4080-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28640570 [Map]; Strand: c
      • AT1G76350.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4080-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG ACTCAAAACT CGCTTACCAC CTCTATCCAC 
    AGGCACCCAC AACTGTATAA GAGAGCCTCT CTCACTAGTG AAATCTTTAA 
    TGTGTGTCAC TGCTTGAACC AATCTTTCCA TAACAGAAAA GCCATGATGA 
    CCACTTGGTC CAATCCACCA ACGTCTGTTA AAGGTAGAGA GATCTCTCCC 
    TTGGTTTTGA TCCTCAAGAC TTGATCTTTC TGGACAATCT TGACCATACA 
    TCTGAGATAA GCTATTAGAT GTGTCTTGCG TTGGAGACCA CATGAAGGAA 
    GAAGGATCAA AAGGGGCTAC AGAAGTTGAA GGACTAAAAT TAAGGAACTC 
    GGATGCATCT GTTGTCTCTA ACCAGCAACC TTCTAGAAGT AATCCGTCCA 
    TGAATGAAGA ATCCATAGCT GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28640572 [Map]; Strand: c
      • AT1G76350.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4080-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGA 
    CCACAAAGGA ACAACCTTTT AGTCATGATC CAATGTGTCA AAGGCTTGCT 
    CATTACAGAG AGATCTCTGA GAATTATCAG TTCTCTACTG AACAGGAGGA 
    TTCAGATTCT AGTTCCAGGG ACTTGGTTGG TTTGCCTGGA AGAGTTTTCT 
    TGGGGAAGGT TCCTGAATGG ACTCCTGATG TGAGGTTTTT CAAGAATGAG 
    GAGTATCCGA GAGTTCAACA TGCTCAAGAC TGTGATGTTC GAGGCACGTT 
    AGCTATTCCT GTGTTTGAAC AAGGTAGTCA GATTTGCTTA GGTGTTATTG 
    AGGTTGTGAT GACTACACAA ATGGTTAAAC TAAGTCCTGA CCTTGAAAGC 
    ATCTGCAGAG CACTTCAGGT TTTTGTTTCT TTTGCTTTTG TCGCCTTTGT 
    CTTTGAAATA AGCT

AT1G76350.1

Model type
Protein coding
Short Description
Plant regulator RWP-RK family protein
Computational Description
Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G20640.2); Has 692 Blast hits to 593 proteins in 43 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 620; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link
InterPro Scan - TAIR