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Mutant Lines
11-4150-1

11-4150-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 17903399 [Map]; Strand: w
- AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: intron2 (CDS)
- AT4G38160.1 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: intron2 (CDS)

ACTGCAGCCT TAGAGAAATG CTGGACTGTA ACACAAAGAA ATTCCATGAG 
AAGTTTGGCT TTTCGGAGGT AACTGCAAGC TCCTAGCTTT TATATCTCTC 
TCTAGTTTTT TCCTTCATCA GGCTCTCTCT GTAAGCNTGT TTTCAGCTTG 
TGCACCAATT TCTAGCACGA GCTTTACCTT GAGTGATTGT GATATCAATA 
GAGTGTTTTC TTCCAGATAT CATCGATTAT TCACTATGCA TTCGTTTATC 
ATGGATTCTA CACTTCCTTT TGAAAATTAC CTAATTATGA TAGAACCACC 
ACCATGGCCC GATCAAGTGC ATATCCATAG AGTGGTTCCT GTGTTTTCAG 
GTATTCAACT GCAATCAAAA TGGGATGTAT ATGTTGTTGG ATAAGTCAGT 
GTCATTATTG GCTTGTGATT ATTGCAGCAA CCGACAAGCA AAAGAAGTGT 
CTGCTTAGCC TAACTGCAGA ACAGAATATG CAGCAATGCA GTCTAGCTGC 
TTGTCGGAAG TATGGGTGGG TAAAAAGCCC CTAGTCATTC CACAAATATG 
GAGGCCCCTA GTCAAAGGTC ACATTTGATG ACAAAGAGAT GGTTGATCGT 
TCTCTGCCTA TATAGTATGT ACCTGTCATA TAAAAATGAG ACCCCCCTCT 
GCTCTCTCTT TTGGATGAGA TCAACCGTAT TTTAACCGGC CNAACTTGAA 
AGTTTTTTTT TGCTTNAATG CTCT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 17903283 [Map]; Strand: w
  - AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
    Distance: 0; Region: exon2 (CDS)
  - AT4G38160.1 - [+] show detail - Mitochondrial transcription termination factor family protein
    Distance: 0; Region: exon2 (CDS)
  - AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 11-4150-1 - 3-prime edge
```
GCTGCAGTCA ATGTTGTTCT TTTTGACAAG TTTAAACCTC GATTCGACCT 
TCTTCTTCAA TCCATGGTGA AAGAATT
```

AT4G38160.1

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1644 Blast hits to 948 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 1414; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38160.2

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38160.3

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1).
Link: InterPro Scan - TAIR