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11-4157-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24347560 [Map]; Strand: w
      • AT5G60570.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -368; Region: promoter
    Flanking Genome Sequence: 11-4157-1 - 5-prime edge 
    CCCGTAAGTG CTCGTTTTCT CTAACCAGAA GCGTGAGTCT TGTTATTCAG 
    CAGCAACTGG AATCAAAGGA ACGTACAAGT TTGAGCTACC GAATCTCTTT 
    GGCTCTTTTT TTTTTTTTTT TTTTTTTTTT TTTNTNGGGG NAAAAAAAAA 
    NNNCCNAAAN TTTTNNAAAA AAAAAAAANN TTTNNTNGGG GGNAAAANNN 
    AAANNTTNAA AANNTTGGGN NNAAAAAAAA AAAACCTTTT TNTTTTTTTT 
    TNAAAAAANN TTTNGGGNAA AAAANNTNNN AAAAAAANCN CCCCCCNGGG 
    NNNGNAANNN CCNGGGNCNN TNNAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24347444 [Map]; Strand: w
      • AT5G60570.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -484; Region: promoter
    Flanking Genome Sequence: 11-4157-1 - 3-prime edge 
    CTTACGGGGC TGTTAAAGGT TCTTCAGGGG GTCTTCTCAA GGTAATTGCA 
    AGAGTCACTA TCTCGTTTAC CTTGATTTCC AAGTCATTAG TTAGTGTTGG 
    CGAGAACAAT ACACGATCTT GGAGAAGAAA AGTGTTTGAT AGAACATTTT 
    CACCTCGCTA GAAATGAAAT GCCTTTCAAC ATCTTTTGAA ATCAAAGAGA 
    TGATCGATCT TTATTATATA TATCTTATAA AAGTAAAGAG CCTCCACGAT 
    GAAGAGCACA TGAAGAAAAT AGGCTATTAT AATATAATTT AGCTAATAGT 
    TATAAGTCTT CTTCTTTGTG CTTGTTAGTT CGCTTCCTCT TCTTCTCTTT 
    CATTTTCGAA TT

AT5G60570.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G26930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR