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11-4335-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 218504 [Map]; Strand: w
      • AT5G01560.1 - [+] show detail - lectin receptor kinase a4.3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4335-1 - 5-prime edge 
    TNNNACANAN NTTNANANCG GGNNAAACTA ACAAATCGGT TATACGATAA 
    CGGTCGGTAC GGGATTTTCC CATCCTACTT TCATCCGTAG CTATAAAGAA 
    GGTCCCAGAG TCCGTCGGTT TCCTCCCGGA GACGATCTCT AACAGCAAAA 
    CGCCAAACGC GAAAACGTCG GAAGCTGATG AGGAGTTTCC GTTGCGGGCT 
    AGCTCCGGCG CCATATATCC AATCGTGCCG ACGACTACGG TGGTGCACGA 
    TTGAGATCCG CGTTCGTAAA GCCTCGCGAG TCCAAAGTCT CCCAATCTAG 
    GATTCATATC GGAGTCAATC AGAACATTGC TAGGTTTCAC GTCTCTGTGA 
    ATCACGATCT GTTCCCATTC TTCGTGGAGA TACAACAAAC CAGACGCGAT 
    TCCTTTAGCG ATTTGAAAAC GCGCGTTCCA CGACAAAACG GCTCCGCTTC 
    TTCTCGGTTT ACTGTAAAGC AGCGAGTCCA AGCT

AT5G01560.1

Model type
Protein coding
Short Description
lectin receptor kinase a4.3
Curator Summary
Encodes LecRKA4.3, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.
Computational Description
lectin receptor kinase a4.3 (LECRKA4.3); FUNCTIONS IN: kinase activity; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 124782 Blast hits to 123109 proteins in 4852 species: Archae - 131; Bacteria - 14218; Metazoa - 45637; Fungi - 10709; Plants - 35284; Viruses - 441; Other Eukaryotes - 18362 (source: NCBI BLink).
Link
InterPro Scan - TAIR