11-4355-1 - RIKEN Arabidopsis Genome Encyclopedia
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11-4355-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24375719 [Map]; Strand: w
      • AT5G60650.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -921; Region: promoter
      • AT5G60660.1 - [+] show detail - plasma membrane intrinsic protein 2;4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-4355-1 - 3-prime edge
    GCAGCAGCAG CGTTTTACCA TCAGTTTATT TTAAGAGCGG CTGCGATTAA 
    AGCTCTTGGC TCATTTGGCT CCTTTGGCTC CTTTAGGAGC TTTGCTTAAT
    ATACATTTAT TTTAAATTAA ACCACAAGTT ATAAATCTTT GATCAAAATT
    AAAAGGATGA TTACAAATGA ATTAAGTGGA AGTTACATGT GATCTTCTTT
    ATATGTTTCT GTTTTTTTGT TCTCTCTTTC ATTTCATGGA ATTTCCCATT
    CGTGTAATTG TAAATGTGGT TTTAATTAAT GTTGCTTTAA GATAAAATCT
    CAAGTTCGCT TTATCTTTTC GTAGAGTTGA CGTTAATTTT GTCTTTTGAT
    TGTATTTCTC TCGGGAATCA ACATATGTCA CGCATGTTTT AAATCTCAAC
    TTTGTATTTC CTTCCAAGCA TTTTTTTAGG TTTATGTGGA TTAATTAGGG
    ATTCCAATAT AACCCAAATT GTGGACCCGA TTAATAAAAT TTCCGTATCC
    TTGTTTTCTT TTTCCATTGC GGTTCCTTCA AGCTAACAAA CTCTTCATGC
    ATTCTTTGTC ACCAATCTTA CCAAAAATAC GAAAGAAGAG AACAAATCGT
    ATGACCTTAA TTTAAAATCA TTTGTTCCAC ATACCTATAT CAAATATATA
    ATAAACGAGT AAATTACAAA GGGTCATAAG ATTTTTGAAA AAAGAGAGAG
    GGTAAAACCA CTATNTATAT TACGAN

AT5G60650.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60660.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 2;4
Curator Summary
A member of the plasma membrane intrinsic protein subfamily PIP2.When expressed in yeast cells can conduct hydrogen peroxide into those cells.
Computational Description
plasma membrane intrinsic protein 2;4 (PIP2;4); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2 (TAIR:AT2G37170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR