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11-4393-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1739901 [Map]; Strand: w
      • AT1G05790.1 - [+] show detail - lipase class 3 family protein
        Distance: 2416; Region: intergenic
      • AT1G05800.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -1303; Region: intergenic
    Flanking Genome Sequence: 11-4393-1 - 5-prime edge 
    CCCTTAACCT ATGCTTTCAC ATGATCACTC GACGTTAACA TAAATTGTGT 
    GTGTAGGTCA GTTATTTTTT ATTTTATTTT TGTGACAGCA AGGGTTAGTT 
    TGTAACTAAT TCCCACGTTG AATTTTATTC TACTCGTTAA AAGTATGTTA 
    ATTATGGCAG AACATGCAGT TGATCATGAT ACCTCTTGAA TTTTTACTGT 
    TCTCCAAAAA CAATTTTTTA CTGTTCACAA AATGGTGATC CATCAATTTA 
    GCTAGTTTCC ACTATAAATA TAATGAATGG TTTTTCTTTA GTATCAATTT 
    ACGTATCAAC TAGCAAGCAA AAAGATCCCA AAATGCAAAA GTAAAAACGA 
    TAACTTAGAG AACAGATAGC GTTAGGATTT TGACCTTAGG AAACAACATC 
    GAAAACTCCA GTGTACCTTT CTTTTGTCTT TTAAATN

AT1G05790.1

Model type
Protein coding
Short Description
lipase class 3 family protein
Computational Description
lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G42450.1); Has 496 Blast hits to 490 proteins in 107 species: Archae - 0; Bacteria - 1; Metazoa - 175; Fungi - 34; Plants - 194; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05800.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Curator Summary
Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.
Computational Description
DONGLE (DGL); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31690.1); Has 1183 Blast hits to 1177 proteins in 252 species: Archae - 0; Bacteria - 234; Metazoa - 21; Fungi - 238; Plants - 544; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink).
Link
InterPro Scan - TAIR