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Mutant Lines
11-4413-1

11-4413-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 303013 [Map]; Strand: w
  - AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
    Distance: 0; Region: exon4 (CDS)
  - AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
    Distance: 0; Region: exon4 (CDS)
Flanking Genome Sequence: 11-4413-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACTC GGCACCAACA 
ACGGTGGACA TTTCGCTTTC CCTCCTGATT TCGGCGGTGG TGGTGGTTGC 
TTACCTCCGC AGCAGCAGCA GTCGACGGTG ATTAATGGGA TTGATCAGAA 
GTCAGTTTTG CTGGAGCTGG CTTTAACTGC TATGGATGAG TTAGTGAAGC 
T
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 303020 [Map]; Strand: w
- AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon4 (CDS)
- AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon4 (CDS)

CNAANANCTT NANACACGGG NAAAACTACA AATCGGTTTA CGATAACGGT 
CGGTACGGGA TTTTCCCATC CTACTTTCAT CCCANCGAGT TCTAAGGAGG 
AGTTGTAGTG GTGATTATGG TGGTGGCCAA GGAACTTACC GGTGAGGTTA 
CAGACACGAT CAAGCTCGTC TTTTAAACGA GCGTTTTCGA TACNGGAGAT 
GATGTTCTTC AAGAGAGACA TCACCAAGCA TGGCAGGTCC ACCACAATTG 
GTGCAGATTG GATTCCTCAT TGCTTCACGA ATAGACATGT TCTCAGCTCT 
TAACTTATCG TTCTCTTGTC TCAATAACGC GTTCTCATGC CTCTCTAATT 
GAGTCTGCGC CACAATATGA TTTTATTACA AAAGAATT

AT4G00730.1

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00730.2

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR