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11-4456-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13950576 [Map]; Strand: c
      • AT5G35777.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-4456-1 - 5-prime edge 
    GGGNTAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCAG GACATCGGTT AACGAAACCG TGTCAGACAA 
    TGGGAACACT CCCATACTCA AGGCAAATGT GTTACTTCCA TCTGCGAATC 
    CCACCGAACA TGGCGAAATA TTTTTGATGT TATGTTATAG AGAAAGGTTT 
    CCCGTCATGT GGTGAGAAGC CCCTGTATCA AGTATCACAT TACCAAGAGC 
    TCTCTTACCC GACAACTTGT CGACGTTATT GGTGCTTGAT TTTTCGGTGA 
    CCATTTGTTG AAGAACCTTT ATTTGTTCCG GTGTAAAGTC AGGAAAAACA 
    GAGGAATGTG AGCTTGTGGC ATGAGCTGTA AAAGCT

AT5G35777.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 2.0e-67 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR