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11-4465-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 354311 [Map]; Strand: w
      • AT1G02020.1 - [+] show detail - nitroreductase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G02020.2 - [+] show detail - nitroreductase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4465-1 - 5-prime edge 
    GGNANAAACT AAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TAGTTACCGC TGCTGGGGTT GACGCGGAGG 
    GGCCACGTGG AGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 354306 [Map]; Strand: w
      • AT1G02020.1 - [+] show detail - nitroreductase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G02020.2 - [+] show detail - nitroreductase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4465-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    CATCCCACCG AGGCCTATCT CATTGCTCCT CCCATCCCTT CCCTCTCCCA 
    ATCCGCTTTC GTCTCCCACT ATGCTCCCAA AGAGCATTCT TTGGAGGTTA 
    GAGCTCACAT CCCCTCTTCC TTTTTCCCCA ACTTCTTCCC GGAGAATT

AT1G02020.1

Model type
Protein coding
Short Description
nitroreductase family protein
Computational Description
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 762 Blast hits to 681 proteins in 314 species: Archae - 126; Bacteria - 594; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02020.2

Model type
Protein coding
Short Description
nitroreductase family protein
Computational Description
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR