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11-4471-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1209239 [Map]; Strand: c
      • AT1G04450.1 - [+] show detail - ROP-interactive CRIB motif-containing protein 3
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-4471-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTC GCGGGACCGT CGGATCCGAT GTGGGCGACA 
    TGCTTTACAT CGGTAGGAAA CCCGATCTGC ATGTCCTTGT CTTTTTCTTC 
    GTCTGTAATT AGATTTTTTG TTTTCATATA CATACAGAGA TGTGACCTTG 
    TATTGCAAGA AAAGTTAAAA TTGTTCTTGT TAGTGAGTCG ATGAGACTCA 
    CCGAAAATCT GAGTAATGTA GCGAAGGCCT TTAAGAAGGC CTTTCACGGT 
    CGCCATCTCG GGAGGAATGG TTTCCGGTTA GAACTTCAGA TGCTGTAACT 
    CTGTGAATGT GCCAAAACCT AACTTGTAGA GGAAACGAAA AGAACAAATC 
    AACCATTGAA TGGAATTTTT TAACAGATTA GCAGATGTCT GTAAACATTG 
    AAACAGTCCA GACCAGACAA AGATTTGAAC GAGATCAGAG AATTCGAACC 
    TTGATAGCAT TGATTTTCAT TATGGAAATA ATTGAGAAAA GAATTGGAAA 
    GGGAGAGAGA AAAGAGAGAG ATTAGGTTTC AGACAAATTC TTGGTTGCGA 
    AGAAGAGGGA GAGCACTAAA CTTTATTTAC CAAAAAAAAC AAAAAAAACT 
    TTTTCAAGGN GTNAATTNNA ACTGGNAATA TATATATTTT TATAAATAGA 
    ACTAATCTTA TTTTGAGTTT TTGTTGGNGA TAATTGAGGC ANCGTAGNGT 
    TTACTCAATN AATCCTCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1209247 [Map]; Strand: c
      • AT1G04450.1 - [+] show detail - ROP-interactive CRIB motif-containing protein 3
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-4471-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AATGTGCCAA GCTGGGTACG CTTTGTACAT CTGTACGTAT TTTTCCGACT 
    TTATATACGT ATTAGCTAAG TGTACTCATC ATTAGTAAAA CAAAACATGT 
    AGATGGGTGA CTTCAAACCT CAAGAAAACG AGAATGGTCA AGTAGTTTCT 
    CGA

AT1G04450.1

Model type
Protein coding
Short Description
ROP-interactive CRIB motif-containing protein 3
Curator Summary
Encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. The protein most similar to RIC1 (family subgroup III). Gene is expressed predominantly in inflorescence and flower tissue. Interacts with ROP1 to modulate calcium ion influxes required to generate tip-focused calcium gradients.It
Computational Description
ROP-interactive CRIB motif-containing protein 3 (RIC3); FUNCTIONS IN: protein binding; INVOLVED IN: in 7 processes; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: ROP-interactive CRIB motif-containing protein 1 (TAIR:AT2G33460.1); Has 189 Blast hits to 189 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR