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11-4492-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 877098 [Map]; Strand: c
      • AT1G03510.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G03515.1 - [+] show detail - pre-tRNA
        Distance: -550; Region: promoter
    Flanking Genome Sequence: 11-4492-1 - 3-prime edge 
    NATATNACNC NTCNNTNGTA NCNACTACCN CNTNTANGAT ANCGNTGCAN 
    AANGANNNAT NCGGNTTAAC TTANGNNNNC TCNTACAACT CCNCTGNTTC 
    NACTNGCCTN NCCACAGTGA GTGNAANGNN ACANCGNCGC NTNNCNTACT 
    ANCGGNNCNN TCNNNNGAAT CGCTACAGAG CNGTCAAGAA ACGNCGACAN 
    ACCATACNNG CATGCNCNGT TCGTATTGGN NACCACCCTN ACGACAAATG 
    GGNCTCAGGC ANCNACATTG NANTCNNACG GNCTGTGCAT GGACTGNTTC 
    NNCNANANCN GGACNGAATG NTGNCTCGCN CNATANGANA GCAANGGAGA 
    NGACGTGNGC ATNATNAGGT ACCGNGACCG ANGACNGCAN TTGNNNGAAA 
    GAGATTAAGA GCTTGTTCAT GGTTTCCTTG GTTCGCGTAA GAGCTTAATT 
    GTTTGGTGAG AGAGATCAAT TTAGTGCAGC TCGACGCGTA CGAAGAAGAC 
    ATGGAGTGGT GGAGATGGAG CTTTCGGTGT TGGCGTCAGC CTTCAAGAAA 
    TACAAATTAG NTTGNTGGTA AATAGNNATG TTCTAAAACA ACCNAAACAA 
    CAAAGNCGNT GNNNTATGNG GGNAAGTNTN CCCGCTGGNA CGCGGGTGAC 
    CCGGGTTTCN TNCCCGGNAC GGNNATNTTT TTTATTTNNN GGNNGNCAAG 
    CTNANTGGGN CCTNNTTNTN GGGNCCCCT

AT1G03510.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 33405 Blast hits to 13221 proteins in 227 species: Archae - 0; Bacteria - 37; Metazoa - 55; Fungi - 85; Plants - 32781; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03515.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Asp (anticodon: GTC)
Link
InterPro Scan - TAIR